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Name : lysS1 (Cp162_1903) Accession : YP_006438007.1 Strain : Corynebacterium pseudotuberculosis Cp162 Genome accession: NC_018019 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2074277 - 2077525 bp Length : 3249 bp Strand : + Note : - DNA sequence : TTGCATATTATCGATTGCATGCAGAAACGCTGGGAAACCCGAGTAATCCTCTTTACCGCACAGTTAGCCACTATCTGGCT GATTATTGGACTGATACTAAAACATATAAACATTAATCTCATTAGGGATATTAGTTTTGGTTTTTCCTTAATCGGCCTCC CCAACTTCCCCACTCTATTTATCACCATCCTCATGGTGTTACTCACATCGGGGATGCTGCGCGGACACCGAGGGGCGTTG CTGTTTTATCTTCTGGGATTCCAGGTGCCGGATCTGCTTTCTGGCATCTTGTTCTTCGTCTTGGGTCTCTTCAACGATCC CGAGATTACCGGTGATAATGCCAAGTACACGATTATCGCGTTCGCAGTTTCCACGCTGTTTTCTCTGTTCTATCTTGTTT GCGGATACCGCGCGCTTAAAGACTTCCCAGCTCGCGTTGTTGGTTCCTGGGTGCGGGCTCTCAGCACGCTCATCGTTGGC CTCATTATCTCGTTTGTTGTGATGTGGGGTGTGCTGGTCTTGCAGGAGCATCAAGACAGCAGCATAGCGGCAGCCTGGTC TTTCTTCACTGCCATCGGCCTCAGCCCTTCAGAACCGCCTTTCCCAACTGAGCTGCATAACCCGCACTTTATCCGGGTTA TCGGTGGCATCCTTTCCTCCGTGGCGCTCTTTGCCGCCATCGCTATTCTCTTTGGTTCGCGCAAGCATGATGCAGCAACG GCTGAGGAACAGCTTCTTACGCGTAAGTTACTGCTTAATCCCCCGTCGCCGGATTCACTCGCTTATTTTTCCACTCGCTA TGACCGCAGCTTGATCACCTCCCCGGATGAAAAGGCTGCCGTGTCCTTCCGCGTTGTCGACGGTGTATGCCTTGCCGCTG GTGACCCCCTCGGCGATCCAGAATCCTGGCCTGCGGCTGTGGAAAACTGGCGTGAGCATAGCCGTAAGAACGGTTGGGTT CTCGGTGCTGCTTCTGTCTCAGAAGCTGGCGCGAAAGCTTATGCTGCTGCAGGCATGAGCGTGATTACGCTTGGTGATGA GGCAGTAGTAGACGCAGAGAACTTCCATCTCAAGAATATGCCGGAGGTTCGCAAGGAGATAGCCGGACCGCGTAAAGCTG GCTATACCGTCCGGGTGCAGCGTCAGTCGCAGATCCCCGCTGAAGAGCTTCAGCATCTCTCCCAGCTCGCTGAAGCTTGG CGACGCGGCGACGAACGCGGATTCACCATGGCGTCTGGCCGCATCGGCGATCCCCGTGACTCGCGTACTGTCATAGTAAC CGCCCACGATGCTGACGATAACGTCATGGGCCTGCTCTCCTTTGTTCCGTGGGGACGCCGTGGGCTTTCCCTTGACGTTA TGCGCCGTAATCCTGATGCCGTCGGCGGTGTCACAGAGTTTATGGTGGTTGGTCTGGCGCAGGAAGCCGGCAACCTTGGA ATATCCAAGTTTTCCCTAAACTTTGTTACCTTCCGCGAAGCTCTCGATCGCGGTACCTATGTAGCGGCTTCCCTGAGGGA GCGGCTGCTGCTCAAACTGCTTCTCCTGTCTTCTCGCTGGTGGCAGATCCAATCGTTGTACCAATCCAACGTCAAGTATC ATCCGCAATGGCAGTCGCGCTTCCTATGCATTGATCATGGATTCCACACGGCCCGCGTCCTTATTGCTTTTGCTAGCGCC GAGGGTTTCTTGCCTTGGATGAAGGAATATGGGTCTCCTGTGGGCGATCCTCAGGAGATCGCCGCACTTGAATCCGCGGC TCTTATGCCGGCTATCGAGCCGCCAGCTTTATCGGTCCAAGAGCGCATGCGCAAGACAAAGCTGGAGGAGCTTGAGTCGC TCAGCATGAGCCCCTACCCGCCGGCTGTGCCTCGGACTACTTCTATTAAAGAATTACTCGCAGCAGATGCGACCCACACC GTTTCAGAAGCACCGATCTCAGTCACCGGTAGAGTCGCTTTTATCCGTGATCATGGCGGAGTGGTCTTTGCGGATTTGGT TGAGGAGCACACAAAGCTCCAGCTAGTGATTGAGCGCAGTGCAGGACAGACGATGACCTTGTTTAAGCACTTGGTCAGCC GCGGTGACCTCATTTCTGCCACAGGTCAGTTGGGGGAGTCTCGCAACGGTACTCGTTCCCTCATTGTCTCTTCCTGGGAT ATGGCCGCTAAATCGCTTACGCCGATGCCTCGCGTCCCGCTCAGCAACCCGCACTTGCGGGCAAAGTTCCGCCACATGGA CTTTGCGCTTAATAAAAAAGCTACGGATATCTTCCTTGCCCGTTCCAAGGCCGTCAGCGCAGTACGCTCCGTGCTGCAAG AGCAGGGCTATATGGAAGCCGAAACCCCCATTCTGCAGACCATCCATGGTGGTGCAAATGCTCGCCCCTTCAGGACTCAT ATCCGAGCATACGATCAAAACCTCACGCTCAGGATCGCGCCCGAGCTGTACCTCAAGCGCCTGGTGGTCGGCGGCATCCC TCGTGTCTTTGAGATAGGAAGGAACTTCCGTAACGAGGGCGTGGATTCCACCCACAACCCCGAGTTCACGTCGCTGGAGG CCTACCAGTCTTATGGCAACTGGGACACCATGCGGGTGCTTACAGAAGAGCTGATTCGTTCCGCAGCAATCGCCGTCTAC GGGAAGCCAGAGGTGACTACGGCGGACGGACAGGTTCTTGATCTCACCGGATCCTGGCCTGTTGTTCCTGTGTATGATGC GGTGTCTGAGGCCGTCGGCAAGCATATCTCCCCAAACGCAGATGTTTCCGAATATGCAGACATCGCGGAGAAATACGGCA TCACCGCCGCCACCGTGGGTGATCTGGTCAACGAGCTTTACGACGAACTCATCGAACCCAACACCGTCTTCCCCACCTTC TACGCTGGATTCCCGGTGGAGACTTCGCCACTCACAATGGCAGACCCAGATCAGCCGCGCATCGCCCAGCGTTGGGATCT TGTAGCCTGCGGGATGGAGCTAGGCACCGCCTACACAGAGCTCGCGGACCCGCTGGAACAATACGCTCGTCTTTCCGATC AGTCTCTACGCGCCGCTGGCGGCGACGCCGAGGCAATGGAATTGGATGAGAACTTCCTCAAGGCGCTGCAGTTTGGCATG CCGCCCACAGGCGGCCTAGGAATCGGAATTGATCGCTTGGTCATGTTCCTTACCGGCCAAAACATCCGCGAAGTTCTCTC CTTCCCCTTTGTCAGACCAGATACGGACGGATCAGCTCGGGGTTGTTAA Protein sequence : MHIIDCMQKRWETRVILFTAQLATIWLIIGLILKHININLIRDISFGFSLIGLPNFPTLFITILMVLLTSGMLRGHRGAL LFYLLGFQVPDLLSGILFFVLGLFNDPEITGDNAKYTIIAFAVSTLFSLFYLVCGYRALKDFPARVVGSWVRALSTLIVG LIISFVVMWGVLVLQEHQDSSIAAAWSFFTAIGLSPSEPPFPTELHNPHFIRVIGGILSSVALFAAIAILFGSRKHDAAT AEEQLLTRKLLLNPPSPDSLAYFSTRYDRSLITSPDEKAAVSFRVVDGVCLAAGDPLGDPESWPAAVENWREHSRKNGWV LGAASVSEAGAKAYAAAGMSVITLGDEAVVDAENFHLKNMPEVRKEIAGPRKAGYTVRVQRQSQIPAEELQHLSQLAEAW RRGDERGFTMASGRIGDPRDSRTVIVTAHDADDNVMGLLSFVPWGRRGLSLDVMRRNPDAVGGVTEFMVVGLAQEAGNLG ISKFSLNFVTFREALDRGTYVAASLRERLLLKLLLLSSRWWQIQSLYQSNVKYHPQWQSRFLCIDHGFHTARVLIAFASA EGFLPWMKEYGSPVGDPQEIAALESAALMPAIEPPALSVQERMRKTKLEELESLSMSPYPPAVPRTTSIKELLAADATHT VSEAPISVTGRVAFIRDHGGVVFADLVEEHTKLQLVIERSAGQTMTLFKHLVSRGDLISATGQLGESRNGTRSLIVSSWD MAAKSLTPMPRVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPILQTIHGGANARPFRTH IRAYDQNLTLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDSTHNPEFTSLEAYQSYGNWDTMRVLTEELIRSAAIAVY GKPEVTTADGQVLDLTGSWPVVPVYDAVSEAVGKHISPNADVSEYADIAEKYGITAATVGDLVNELYDELIEPNTVFPTF YAGFPVETSPLTMADPDQPRIAQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAEAMELDENFLKALQFGM PPTGGLGIGIDRLVMFLTGQNIREVLSFPFVRPDTDGSARGC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
