Gene Information

Name : potD (Cp162_0185)
Accession : YP_006436351.1
Strain : Corynebacterium pseudotuberculosis Cp162
Genome accession: NC_018019
Putative virulence/resistance : Unknown
Product : Spermidine/putrescine-binding periplasmic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 188364 - 189365 bp
Length : 1002 bp
Strand : -
Note : -

DNA sequence :
GTGTTATCTAGATGGCTGCGATTGCTTGCTGTCTGCGTTGTAGCGATAGTGTCAGCGGTTACGGTGTATCGGACTTTGTT
TCCTACAAAAACTGCTGTGACTATCATGTGCTCGAATGATGTAACAGTGTGTGAGCAGTGGAAGCATGATATTGCCCATG
AGCTGGGACTGAAGGTTCGTTACGTTAGTCTGCCCACCCAGGAAGCATTGAAGCGGCTGCAGACGGGGTCTCATGAATTT
GATGTCTGGGTTGGGGGCCCCTCGGAGAATTATCGCCTGGCTGCCCAGTTGGGTCTATTGCAGGCAGCGGATTTGCCAGC
GGCGGACGCTATTCCGGCGCAGTTTAAAGACCCACAAAATCGGTGGTTTGGGGTGTATGCGTCGGTGTTGAGTGTGTGCA
GTGATCGTGATGCCTTGAACCGCTTAGGGGTTCCAGTTCCGCGTTCGTGGGCAGACGTGATGCGTCCTGAGCTACGCGGT
TGGGTATCGGCGCCGTCGCCAGTGTCCTCTGGAACTGGATATGCGATGTTGTTGAGCATGCAGGCAGCCGGATTGTCTCA
AGAACAGATTGCCAGGATTGTGGATAATGTAGATCGTTTTACACGGTCAGGTAATGCGCCTAGTGACGTGGTAGCGCACG
GTGAAGCTGCAGTGGCGATTTCTTATGAGCCGTATTGTCAAAATAAGACCACGCGTTTGGGACGGGATATGGAGATATCT
TATCCTGCAGAAGGAACGTCATTTGAGATTGCCTCTGGTGGCGTAGTGGCACAAAGACATAATAAGTCGGCGGCGTATGA
GGTGATGAATTGGTTGTTATCGCCGTCGGGCCAAACTTCTGCTCTAAGAGCAGGGTTGCCGCAGATTCCTACAAACAATT
TGGTTGCGAACAATATTTCTACGCGTTTGAAAGACTCACACGGCATTGTTGCAGTCGATCCAACGGTTGCCGATTCTGAG
CGTGAACAGTGGATGAGCTGGTTTTCGGAGCGGCGCATATGA

Protein sequence :
MLSRWLRLLAVCVVAIVSAVTVYRTLFPTKTAVTIMCSNDVTVCEQWKHDIAHELGLKVRYVSLPTQEALKRLQTGSHEF
DVWVGGPSENYRLAAQLGLLQAADLPAADAIPAQFKDPQNRWFGVYASVLSVCSDRDALNRLGVPVPRSWADVMRPELRG
WVSAPSPVSSGTGYAMLLSMQAAGLSQEQIARIVDNVDRFTRSGNAPSDVVAHGEAAVAISYEPYCQNKTTRLGRDMEIS
YPAEGTSFEIASGGVVAQRHNKSAAYEVMNWLLSPSGQTSALRAGLPQIPTNNLVANNISTRLKDSHGIVAVDPTVADSE
REQWMSWFSERRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potD YP_005680457.1 Spermidine/putrescine-binding periplasmic protein Not tested PiCp 3 Protein 1e-134 99
potD YP_005682548.1 Spermidine/putrescine-binding periplasmic protein Not tested PiCp 3 Protein 1e-134 99
cpfrc_00181 YP_003782581.1 hypothetical protein Not tested PiCp 3 Protein 1e-134 99
CDB402_0207 YP_005126720.1 ABC transporter substrate-binding protein Not tested Not named Protein 7e-123 89