Gene Information

Name : fadF (Cp162_1887)
Accession : YP_006437991.1
Strain : Corynebacterium pseudotuberculosis Cp162
Genome accession: NC_018019
Putative virulence/resistance : Unknown
Product : protein fadF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2056813 - 2059476 bp
Length : 2664 bp
Strand : +
Note : -

DNA sequence :
ATGCCGCTTGCAGTAACCAGCGCAGTCACGCCCACCACTGTAGTGTTGGGCGTCCTCGGCATCGTCTTGTCATTACCCGC
GTGGTTTTTCTTCCTCCGCGCGGCATGGCGGCTCTATTCCTTCATTACTTCTGGGCAACCGTCTCCAGAGCGCATAAACA
ACCCGGCGCGCAGAGCGTGGCAAACGTTTAAGGAAGTCTTCTTCCATACCGAGCTCATGCGCAAACCCGCTGTAGCTGTT
GCCCACTGGTTTGTCATGCTGGGTTTCCTCTTTGGTTCTATCGTCTGGTTCGAGGCCTATATCCAAACTTTTAACCCGGC
GGGTGGCTGGCCTCTCCTCTCACATTGGCGCGTTTATCACCTTGTAGAAGAAATCTTGGCGCTGGGCACTGTCTTTGGGA
TTCTCTTCCTCATCTTTGTTCGACTTAATGCGGGCGTGCGCAGCCGTTTTTCTCGTTTCTATGGCTCCTACGCCAAAGCC
GCCTATTTTGTAGAGGCAGTCGTCTTTATTGAGGGCCTAGGCATGCTTTTGGTAAAGGCCTCTAAAATCTCTACGTTTGG
GGATGGCTCCGCCTGGGCAGACTTTTCCACTATTTACCTGGCCACGCTGCTCCCTAGCAGCCCGGTCTTAGTCAGCGTCT
TTGCCCTGGTGAAGTTGCTTAGCGGCATGGTGTGGCTCATCGTCGTTGCGCACAATCTCACGTGGGGCGTGGCATGGCAT
AGGTTCCTGGCGTTTTTCAATATCTTCTTCCAACGTAACCCCGACGGCAGTCCAGCGCTGGGCAAACTACAGCCAATGTA
TTCGGGGACAAAGCCGCTCACGCTGGAGACTATTGAAGAAGAAGATAGCCTCGGCGTAGGCACCCTTGCAGACGCATCAT
GGAAGATGCTTCTCGACGCCACCACCTGCACCGAATGCGGACGATGCCAAGAACAATGCCCTGCATGGCATACCGAAAAA
CCACTTAGCCCAAAGCTCTTTATCACCGATATTCGTGACGCAGCCGTCGCACAGTCCTCTTATTTACAAGACCCTGCTAC
CTTTGCTGCAGACGATTCCCACACTAACGTTGACGTGCTCAAACTCGTGGGGGAAGCACAGGTAATCTCCCCTGATGTTT
TATGGTCTTGTACTAACTGCGGAGCCTGCGTTGAGCAATGCCCCGTAGACATAGAGCATATCGATCACATGGCTAACCTT
CGCCGTTTCCAGGTCCTCGCGGAATCCGAATTCCCCTCTGAGTTGACGGGAATGTTTAAGAATCTTGAGACCAAAGGCAA
TCCGTGGGGCAGAAACTCTATTGAGCGGAAAACATGGATCGATGAGGCTCGTCGCGATGGTATTGAAGTCCCCGTGTTGG
GCGAGGACATTACAGATTTCTCTGATACGGAATATCTCTTCTGGGTAGGGTGCGCAGGTGCCTTTGACAAGGACGGTAAG
AAGACAACACGCGCCGTCGTGGAGCTTCTTCACGTCGCCGGCGTTAAATTTGCAGTACTTTCCAAAGGGGAAACCTGCAC
AGGTGATCCCGCACGCCGAGCCGGTAACGAGTTCCTCTTCCAGATGCTCGCCGCAGAGAACGTGGACACTCTTAACGATG
TTTTTGATGGGGTCCCACAAGGGAGCCGCAAAATTATCACCACGTGTCCACATTGTTTTAATACATTGCGCAATGAATAC
CCAGACTTTGACGGGCACTTTGATGTTTTCCACCACACCCAGCTGCTGAATCGACTGGTACGCGAAAAGCGCCTCACGCC
GGTTCCACGGCGCCCTGAAGATCGTAAACCCATCACCTATCACGACCCCTGCTTCCTTGGTCGCCACAATAAGATCTTTG
ATCCACCCCGTGAGCTACTTAGCGCAACAGGGATGGACCTGACAGAGATGGGCAGGACCAAAAACGAGGGCTTTTGCTGT
GGCGCCGGTGGTGCGCGGATGTTCATGGAAGAAAAAATCGGCACGCGCATCAACGAAAATCGCGCGGCTGAAGCTATCAA
TACTGGAGCTCAGGAGATCGCAGTCGGTTGTCCCTTCTGTAATTCCATGCTCAGCACTGGTGTTAAATCTGTTGCTGAGG
ACGCACAAAAAGCTCCAAAGGTGCACGACGTAGCGCTGATGCTCCGCGATTCCGTGCTTGTCGACGGGCATTTGCCCGAA
CCCAAGCAGCGGGTCTTCCTCGATCCGCCAATCCGCCAGCCTAAAAAGAAGCCAGTAGCCACACAGGAGACGCCCAAGGC
ACCACCTGTGGCGGCTCCTCCTGCTATGCCACAGCCCCCGTCTCTCCCCGCCCCCGGAATACCTACACCTGCAATCCCGA
CTCCGCCAGGTGGGACTCCTCCTGTTCCGCAACCCCCACAAGCGACGGCACCGGGGAGTCCTGTACCGGGAGCTCCCACT
CCGGGAGTTACTCCCATATCTGTCCCACCCATGCCCACTGCGCCAGCCGCAGTTCCCCCAACGCCGCCAGTTGCTGCACC
TCCTATGGCGGTACCTCCTGCCGCGGCGCCTCCAGCTGCGGTGCCTCCAGCGGCAGTGCCTCCGGCAGCCGGGCCACCTG
TTGCTAAGCCCCCTATAGCTACACCTCCGGCCGCAACACCTCCTATGGCTGCGCCCCCTGGAAGGCAATCGGAGTATCCT
GAGGATACTTCCGAGAAAAAGTAG

Protein sequence :
MPLAVTSAVTPTTVVLGVLGIVLSLPAWFFFLRAAWRLYSFITSGQPSPERINNPARRAWQTFKEVFFHTELMRKPAVAV
AHWFVMLGFLFGSIVWFEAYIQTFNPAGGWPLLSHWRVYHLVEEILALGTVFGILFLIFVRLNAGVRSRFSRFYGSYAKA
AYFVEAVVFIEGLGMLLVKASKISTFGDGSAWADFSTIYLATLLPSSPVLVSVFALVKLLSGMVWLIVVAHNLTWGVAWH
RFLAFFNIFFQRNPDGSPALGKLQPMYSGTKPLTLETIEEEDSLGVGTLADASWKMLLDATTCTECGRCQEQCPAWHTEK
PLSPKLFITDIRDAAVAQSSYLQDPATFAADDSHTNVDVLKLVGEAQVISPDVLWSCTNCGACVEQCPVDIEHIDHMANL
RRFQVLAESEFPSELTGMFKNLETKGNPWGRNSIERKTWIDEARRDGIEVPVLGEDITDFSDTEYLFWVGCAGAFDKDGK
KTTRAVVELLHVAGVKFAVLSKGETCTGDPARRAGNEFLFQMLAAENVDTLNDVFDGVPQGSRKIITTCPHCFNTLRNEY
PDFDGHFDVFHHTQLLNRLVREKRLTPVPRRPEDRKPITYHDPCFLGRHNKIFDPPRELLSATGMDLTEMGRTKNEGFCC
GAGGARMFMEEKIGTRINENRAAEAINTGAQEIAVGCPFCNSMLSTGVKSVAEDAQKAPKVHDVALMLRDSVLVDGHLPE
PKQRVFLDPPIRQPKKKPVATQETPKAPPVAAPPAMPQPPSLPAPGIPTPAIPTPPGGTPPVPQPPQATAPGSPVPGAPT
PGVTPISVPPMPTAPAAVPPTPPVAAPPMAVPPAAAPPAAVPPAAVPPAAGPPVAKPPIATPPAATPPMAAPPGRQSEYP
EDTSEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fadF YP_005682164.1 Protein fadF Not tested PiCp 7 Protein 0.0 99
fadF YP_005684256.1 Protein fadF Not tested PiCp 7 Protein 0.0 99
cpfrc_01915 YP_003784315.1 hypothetical protein Not tested PiCp 7 Protein 0.0 99
fadF YP_005686348.1 Protein fadF Not tested PiCp 7 Protein 0.0 99