|
Name : clpB (Cp162_1850) Accession : YP_006437958.1 Strain : Corynebacterium pseudotuberculosis Cp162 Genome accession: NC_018019 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 2009893 - 2012442 bp Length : 2550 bp Strand : - Note : - DNA sequence : ATGAATTCATTTAACCCAACAACTAAAACTCAGGAGTCCTTGCAGGTTGCGCTGCAGCAGGCGTCTTCCTTAGGAAACCC AGATATTCGGACAGCGCATTTACTTGCGGCGATCTTAGGCCAGGAGGACGGCATCGCCGTGCCCGTCTTGCGCGCTACGG GCGTAGACCCACAGGTGGTGGCCAAGGAGGCCAATGCACTTGTAGCGGGGTATCCCAAGGCTGAGGGGTCTGGCATGGCC AACCCCAACTTTAACCGCGATGCTCTCAACGCTCTGACCGCTGCGCAAGAGCTGGCTGGTGAATTAGGTGATGAGTACGT ATCTACTGAGGTGCTACTCGCCGCGATTGCTCGGGGTAAGTCCGATGCTGCGGAGTTGCTGACCAAGCGAGGCGCTACGT ATGACGTGATTAAGGGAGTGTTCCCCTCTGTGCGAGGAAGCAAGAAGGTGACTAGTCAGGATCCGGAAGGCCAGTTCCAG GCTCTGGAGAAGTACTCCACCGACCTTACGGCTCGTGCTCGTGAGGGAAAGATTGATCCCGTTATCGGGCGTGACTCGGA GATTCGGCGTGTGGTTCAGGTGCTCAGCCGCCGAACTAAGAATAACCCCGTTCTTATTGGTGAGCCTGGCGTGGGTAAGA CCGCGATCGTAGAAGGCCTGGCTCGCAGGATTGTTGCTGGCGATGTTCCGGAATCACTGAAGGGGAAGACCCTTATTAGT CTTGATCTTGGATCGATGGTCGCTGGCGCCAAGTACCGTGGCGAGTTTGAGGAACGCCTCAAGGCTGTGCTTGATGAGAT CAAGTCGGCAGAGGGCGAGATCATTACTTTTATTGATGAGCTGCACACCATTGTTGGTGCAGGCGCTACGGGCGATTCCG CTATGGACGCCGGCAATATGATCAAGCCACTGCTAGCGCGTGGCGAGCTACGCCTAGTGGGTGCCACTACTCTGGATGAA TACCGCAAGTACATCGAGAAAGATGCGGCCTTGGAACGCCGTTTCCAGCAGGTCTTTGTGGGCGAACCCTCTGTAGAAGA CGCTATCGGTATTCTGCGCGGCCTTAAAGAGCGCTACGAGGTGCATCATGGTGTGCGTATTCAGGATTCCGCATTGGTTG CCGCTGCCACTCTCTCGGATCGCTATATCACGTCTCGTTTCTTGCCGGACAAAGCAATTGACCTGGTCGATGAGGCCGCG AGCCGCCTGCGCATGGAGATCGATTCTTCCCCGCAAGAGATCGATGAGCTAGAGCGTGTTGTGCGTCGCCTGGAGATTGA AGAAGTCGCACTGAGCAAGGAGACGGATGCGGCCTCTCAGCAGCGCCTGGAGAAGTTGCGCCAGGAGCTTGCCGACGAGC GCGAGAAACTCGGCGAACTCAAAGCCCGCTGGAATAATGAGAAGTCTGCAATAGATAAGGTGCGCGAGGCCAAGGAAGAG CTAGAGCATCTGCGTTCTGAGTCGGAGATCGCTGAGCGCGAAGGCGACTACGGCAAGGTGGCGGAGCTGCGCTATGGCCG AATCCCAGAGTTGGAAAAGCAGGTGGCTGAGGCTGAGGCCCATACAACTGAGACCACTATGCTTTCGGAGGAGGTAACAC CGGACACCATCGCTGATGTGGTTTCTGCTTGGACTGGTATCCCCGCGGGCAAGATGTTGCAGGGGGAGACGGAAAAGCTT CTGCGCATGGAATCTGAGCTGGGTAGCCGAGTGGTTGGGCAGCTAGAAGCCGTTGAGGCTGTGTCTGATGCTGTGCGCCG TGCGCGCGCTGGCGTAGCTGACCCGAACCGTCCGACTGGTTCCTTCCTTTTCCTTGGGCCTACGGGCGTGGGTAAGACTG AGCTGGCTAAAGCTTTGGCCGAGTTCATGTTTGATGACGAGCGCGCGATGGTGCGCATAGATATGTCTGAGTACGGGGAG AAGCATTCCGTGGCTCGACTTGTTGGTGCCCCTCCCGGATACGTTGGTTATGATCAAGGCGGTCAGCTCACCGAGGCTGT GCGGCGGCGTCCCTACACGGTGGTGCTTTTTGACGAGGTAGAGAAAGCACATTCCGATGTCTTTGACATTCTGCTGCAGG TACTGGATGAAGGCAGGCTTACCGACGGCCAAGGTCGTACCGTTGATTTCCGAAACACCGTGCTCATCCTCACCTCCAAC CTGGGGGCCGGCGGTACCCGTGAGCAAATGATGGATGCCGTCAAACGAGCATTCAAACCGGAATTTGTTAACCGCCTGGA TGACGTGGTGATCTTTGATCCGCTCTCAGAGGAGCAGCTCACTCATATTGTGGAGATCCAGATTGCTCAGCTGGCAAACC GACTTTCGGCGCGTCGCCTGACCTTGCAGGTCTCGGATGTTGCAAAGTTGTGGTTGGCTGAACGCGGTTATGAGCCCGCC TATGGCGCGCGTCCGCTGCGTCGTCTGATCCAACAGGCGATTGGTGATCAGTTGGCCAAGAAGCTGCTGGCAGGCGAGAT CCGTGACGGCGACACCGTGCACGTGGACGTGGCCGATGGCGGCGAGGCCTTAGAGTTGGCCAAGAGATAA Protein sequence : MNSFNPTTKTQESLQVALQQASSLGNPDIRTAHLLAAILGQEDGIAVPVLRATGVDPQVVAKEANALVAGYPKAEGSGMA NPNFNRDALNALTAAQELAGELGDEYVSTEVLLAAIARGKSDAAELLTKRGATYDVIKGVFPSVRGSKKVTSQDPEGQFQ ALEKYSTDLTARAREGKIDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLIS LDLGSMVAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNMIKPLLARGELRLVGATTLDE YRKYIEKDAALERRFQQVFVGEPSVEDAIGILRGLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAA SRLRMEIDSSPQEIDELERVVRRLEIEEVALSKETDAASQQRLEKLRQELADEREKLGELKARWNNEKSAIDKVREAKEE LEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAHTTETTMLSEEVTPDTIADVVSAWTGIPAGKMLQGETEKL LRMESELGSRVVGQLEAVEAVSDAVRRARAGVADPNRPTGSFLFLGPTGVGKTELAKALAEFMFDDERAMVRIDMSEYGE KHSVARLVGAPPGYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILTSN LGAGGTREQMMDAVKRAFKPEFVNRLDDVVIFDPLSEEQLTHIVEIQIAQLANRLSARRLTLQVSDVAKLWLAERGYEPA YGARPLRRLIQQAIGDQLAKKLLAGEIRDGDTVHVDVADGGEALELAKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-96 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-98 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006437958.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 2e-106 | 44 |
| clpB | YP_006437958.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 1e-108 | 41 |
