Gene Information

Name : srtB (Cp162_1847)
Accession : YP_006437955.1
Strain : Corynebacterium pseudotuberculosis Cp162
Genome accession: NC_018019
Putative virulence/resistance : Unknown
Product : Sortase B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2007072 - 2008031 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence :
ATGCTAGATCCTGTAGCAAAGACTGAACGTCCTAAAGCCGTTCATCGTTTGAAGCAGAAACGATCCGGGACGAAAAATAA
CCATGCATTAGCTGCGCTACTCGTGATTATTGGATTAATTGTCATGGTCTACCCAGTGGTTTCTACCCAATGGAACAATT
GGAAACAGCAACGTGCAGCAGCAGAGTATGCCAAGATCGATAATTCAACGCCGAGAGTAGTTCATGAAGAAGCCTGGGAC
GCTGCTCATAAATATAACGAGGAGCGTGCACAAGGGCCGATTCTTGATCCATGGGTTAGCCGTTTTGTTCCAGATAACTA
CGCGTATCAGGAATACTTAAGCGTATTAAATACGCAGGATGCAATGGGGCGTATTATCCTTCCATCCATAAAAACGGACC
TACCTATCTATCACGGTTCGAGCGAGGCCGTCTTACAAAAAGGGATTGGTCATCTTTTCGGATCCGACCTTCCAGTGGGT
GGACGCGGGAGTCACTCGGTGTTGACTGGACATACGGGGATACCGACAGCAACACTTTTTGACAATTTAAATCGTGTTAA
AGAAGGCGATGCTTTCTTTATTCACATCGCTGGACACAAAATTAAATACGAAGTCGATCAGATCAAGATAGTTCTTCCTA
ATGAGACAGAAGATCTAAAAGTTGAAGCCGGCAAAGACTTAATCACATTAGTGACCTGTACTCCCTACGGGATTAACACA
CATCGTTTATTAGTTCGTGGACATCAAGTTCCAATAGCCGAAGAAGAAAAAAGCATGCTCAATGAGGCGCAGGGTGTCTC
TTGGCAATGGTGGATGTATGTACTTACCGCAATATTCATCGTAGGCGTCATTGGGCTTATCGCGTGGTTAATAAAACAAT
CACGTGTGTCTTCTAAGCGGAATAAAGACTCTCTGATTGTCCCAGACTCCGAATCTACCGAGAATAAAACTGAACTGTGA

Protein sequence :
MLDPVAKTERPKAVHRLKQKRSGTKNNHALAALLVIIGLIVMVYPVVSTQWNNWKQQRAAAEYAKIDNSTPRVVHEEAWD
AAHKYNEERAQGPILDPWVSRFVPDNYAYQEYLSVLNTQDAMGRIILPSIKTDLPIYHGSSEAVLQKGIGHLFGSDLPVG
GRGSHSVLTGHTGIPTATLFDNLNRVKEGDAFFIHIAGHKIKYEVDQIKIVLPNETEDLKVEAGKDLITLVTCTPYGINT
HRLLVRGHQVPIAEEEKSMLNEAQGVSWQWWMYVLTAIFIVGVIGLIAWLIKQSRVSSKRNKDSLIVPDSESTENKTEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-98 69
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-77 60
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-69 55
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-61 49
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 9e-52 46
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 3e-52 46
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-49 45
srtE YP_005139150.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-52 42