Gene Information

Name : Fleli_3954 (Fleli_3954)
Accession : YP_006436049.1
Strain : Flexibacter litoralis DSM 6794
Genome accession: NC_018018
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 4739789 - 4741549 bp
Length : 1761 bp
Strand : +
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
ATGCAACCAATACTTAGCGAACAAGAAATTCTGCGTCGTCAGAAAAGAGAACAACTTATACAATTAGGAATAGAACCTTA
TCCTGCTGCACTTTATAATTTTACGCATACAACCAAACAGATTAAAGCTTTTTTTCCAGAAGAAAAACCAGAAGGCGAAG
AAAATTTTGATGATTTTAAGGAAATTTCTCTTGCAGGTCGTTTGATGACAAATCGTATTCAAGGTTCGGCTGCTTTTGCA
GAAATTGAAGATAGCACAGGACGTTTGCAAGTTTATTTTCGTAGAGATGATATTTGTCCTGATGAAGATAAAACGATGTA
TAATACTGTTTTCAAAAAGCTATTAGATATTGGAGATATTATTGGCGTAAAAGGATATATTTTTCGTACGAATGTAGGCG
AAATTACGCTTCGTGCTACTGAATTTACAATTCTTACAAAATCTTTACATCCTCTACCTGTCGTAAGGCGAGTAGAAAAT
GAGGATGGAACAGTAAAAACTTATGATGCCTTTACAGATTCTGAGCAGCGTTATCGTCAGCGTTATGTAGATTTAATTGT
AAATCCTGAGGTAAGAGATGTTTTCAAAAAACGCTCTCAACTTATGAATGTAATGCGTGAGTTTTTGAATGATAAAGATT
ATTTAGAAGTAGAAACACCAATTTTACAGCCAATTTATGGAGGTGCTGCTGCTCGTCCTTTCAAAACGCATCACAATACA
TTAGATATGACTCTTTATTTGCGTATTGCAAATGAGCTTTATCTAAAAAGATTGATTGTTGGTGGTTATGATGGTGTTTA
TGAGTTTTCAAAAGACTTTAGAAATGAAGGAATGAGCCGTTTTCATAATCCAGAATTTACTCAAATTGAACTCTATGTAG
CTTACAAAGACTACGAATGGATGATGAATTTGGTAGAAGAAATGGTAGAAAAAATTGCTTTAAAACTTCACAATTCAACA
GAAGTACAGGTAGGCGAAAATGTAATTAATTTTGCTCGTCCTTGGAAGCGTTACACAATGTACGAAGCTATTGAGCATTT
TACAGGTGTTGATATTTCTGAAATGAGCGAGGAAGAAATGCGTAAAGCTGCATTACAATTAAGTGTTCCGATTGATGAAA
CAATGGGAAGAGGAAAATTGATTGATGAGATTTTTGGAGAACATTGTGAGCCAAAACTGATTCAGCCTACATTTATTACA
GATTATCCTGTTGAGATGTCGCCACTTGCCAAAAAACACAGAACTAAAGAAGGTTTGGTAGAGCGTTTTGAAGCAGTTTG
TAATGGAAAAGAAATTTGTAACGCCTTTTCTGAACTGAATGACCCAATCGACCAAAGAAAACGTTTTGAAGAACAGTTAG
AACTTGGAAAACGAGGCGATGATGAAGCAATGATTTTGGATGAAGATTTTTTAAATGCATTGGAATACGGAATGCCACCA
ACGGCAGGTTTAGGAATCGGAATTGACCGTCTTTCTATGATTATGACGAATCAAAATTCTATTCAAGATGTATTATTCTT
CCCTCAAATGCGTCCTAAAAAACAACCAAAATACGCAACAGAACAAGATTATACAGATTTAGGAATCCGTGCAGAACTTA
TTCCAATTATTCAGAAATTAGGTTTCCTTACTATTGAAGCATTGAAAGAAGCAATTCCTTCAAAACTATTTAATGATATG
TGTGGAATGCGTAAAAAAATGAAACTCAAAGAAGTAAAAAATCCAACCAAAGAAGAAGTAGAAGGTTGGTTGAAAAAATA
G

Protein sequence :
MQPILSEQEILRRQKREQLIQLGIEPYPAALYNFTHTTKQIKAFFPEEKPEGEENFDDFKEISLAGRLMTNRIQGSAAFA
EIEDSTGRLQVYFRRDDICPDEDKTMYNTVFKKLLDIGDIIGVKGYIFRTNVGEITLRATEFTILTKSLHPLPVVRRVEN
EDGTVKTYDAFTDSEQRYRQRYVDLIVNPEVRDVFKKRSQLMNVMREFLNDKDYLEVETPILQPIYGGAAARPFKTHHNT
LDMTLYLRIANELYLKRLIVGGYDGVYEFSKDFRNEGMSRFHNPEFTQIELYVAYKDYEWMMNLVEEMVEKIALKLHNST
EVQVGENVINFARPWKRYTMYEAIEHFTGVDISEMSEEEMRKAALQLSVPIDETMGRGKLIDEIFGEHCEPKLIQPTFIT
DYPVEMSPLAKKHRTKEGLVERFEAVCNGKEICNAFSELNDPIDQRKRFEEQLELGKRGDDEAMILDEDFLNALEYGMPP
TAGLGIGIDRLSMIMTNQNSIQDVLFFPQMRPKKQPKYATEQDYTDLGIRAELIPIIQKLGFLTIEALKEAIPSKLFNDM
CGMRKKMKLKEVKNPTKEEVEGWLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 5e-93 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fleli_3954 YP_006436049.1 lysyl-tRNA synthetase VFG1668 Protein 3e-93 44