Name : Fleli_3954 (Fleli_3954) Accession : YP_006436049.1 Strain : Flexibacter litoralis DSM 6794 Genome accession: NC_018018 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 4739789 - 4741549 bp Length : 1761 bp Strand : + Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : ATGCAACCAATACTTAGCGAACAAGAAATTCTGCGTCGTCAGAAAAGAGAACAACTTATACAATTAGGAATAGAACCTTA TCCTGCTGCACTTTATAATTTTACGCATACAACCAAACAGATTAAAGCTTTTTTTCCAGAAGAAAAACCAGAAGGCGAAG AAAATTTTGATGATTTTAAGGAAATTTCTCTTGCAGGTCGTTTGATGACAAATCGTATTCAAGGTTCGGCTGCTTTTGCA GAAATTGAAGATAGCACAGGACGTTTGCAAGTTTATTTTCGTAGAGATGATATTTGTCCTGATGAAGATAAAACGATGTA TAATACTGTTTTCAAAAAGCTATTAGATATTGGAGATATTATTGGCGTAAAAGGATATATTTTTCGTACGAATGTAGGCG AAATTACGCTTCGTGCTACTGAATTTACAATTCTTACAAAATCTTTACATCCTCTACCTGTCGTAAGGCGAGTAGAAAAT GAGGATGGAACAGTAAAAACTTATGATGCCTTTACAGATTCTGAGCAGCGTTATCGTCAGCGTTATGTAGATTTAATTGT AAATCCTGAGGTAAGAGATGTTTTCAAAAAACGCTCTCAACTTATGAATGTAATGCGTGAGTTTTTGAATGATAAAGATT ATTTAGAAGTAGAAACACCAATTTTACAGCCAATTTATGGAGGTGCTGCTGCTCGTCCTTTCAAAACGCATCACAATACA TTAGATATGACTCTTTATTTGCGTATTGCAAATGAGCTTTATCTAAAAAGATTGATTGTTGGTGGTTATGATGGTGTTTA TGAGTTTTCAAAAGACTTTAGAAATGAAGGAATGAGCCGTTTTCATAATCCAGAATTTACTCAAATTGAACTCTATGTAG CTTACAAAGACTACGAATGGATGATGAATTTGGTAGAAGAAATGGTAGAAAAAATTGCTTTAAAACTTCACAATTCAACA GAAGTACAGGTAGGCGAAAATGTAATTAATTTTGCTCGTCCTTGGAAGCGTTACACAATGTACGAAGCTATTGAGCATTT TACAGGTGTTGATATTTCTGAAATGAGCGAGGAAGAAATGCGTAAAGCTGCATTACAATTAAGTGTTCCGATTGATGAAA CAATGGGAAGAGGAAAATTGATTGATGAGATTTTTGGAGAACATTGTGAGCCAAAACTGATTCAGCCTACATTTATTACA GATTATCCTGTTGAGATGTCGCCACTTGCCAAAAAACACAGAACTAAAGAAGGTTTGGTAGAGCGTTTTGAAGCAGTTTG TAATGGAAAAGAAATTTGTAACGCCTTTTCTGAACTGAATGACCCAATCGACCAAAGAAAACGTTTTGAAGAACAGTTAG AACTTGGAAAACGAGGCGATGATGAAGCAATGATTTTGGATGAAGATTTTTTAAATGCATTGGAATACGGAATGCCACCA ACGGCAGGTTTAGGAATCGGAATTGACCGTCTTTCTATGATTATGACGAATCAAAATTCTATTCAAGATGTATTATTCTT CCCTCAAATGCGTCCTAAAAAACAACCAAAATACGCAACAGAACAAGATTATACAGATTTAGGAATCCGTGCAGAACTTA TTCCAATTATTCAGAAATTAGGTTTCCTTACTATTGAAGCATTGAAAGAAGCAATTCCTTCAAAACTATTTAATGATATG TGTGGAATGCGTAAAAAAATGAAACTCAAAGAAGTAAAAAATCCAACCAAAGAAGAAGTAGAAGGTTGGTTGAAAAAATA G Protein sequence : MQPILSEQEILRRQKREQLIQLGIEPYPAALYNFTHTTKQIKAFFPEEKPEGEENFDDFKEISLAGRLMTNRIQGSAAFA EIEDSTGRLQVYFRRDDICPDEDKTMYNTVFKKLLDIGDIIGVKGYIFRTNVGEITLRATEFTILTKSLHPLPVVRRVEN EDGTVKTYDAFTDSEQRYRQRYVDLIVNPEVRDVFKKRSQLMNVMREFLNDKDYLEVETPILQPIYGGAAARPFKTHHNT LDMTLYLRIANELYLKRLIVGGYDGVYEFSKDFRNEGMSRFHNPEFTQIELYVAYKDYEWMMNLVEEMVEKIALKLHNST EVQVGENVINFARPWKRYTMYEAIEHFTGVDISEMSEEEMRKAALQLSVPIDETMGRGKLIDEIFGEHCEPKLIQPTFIT DYPVEMSPLAKKHRTKEGLVERFEAVCNGKEICNAFSELNDPIDQRKRFEEQLELGKRGDDEAMILDEDFLNALEYGMPP TAGLGIGIDRLSMIMTNQNSIQDVLFFPQMRPKKQPKYATEQDYTDLGIRAELIPIIQKLGFLTIEALKEAIPSKLFNDM CGMRKKMKLKEVKNPTKEEVEGWLKK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-93 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Fleli_3954 | YP_006436049.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-93 | 44 |