Gene Information

Name : Fleli_2835 (Fleli_2835)
Accession : YP_006434981.1
Strain : Flexibacter litoralis DSM 6794
Genome accession: NC_018018
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3382175 - 3382855 bp
Length : 681 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group

DNA sequence :
ATGCTTTCTCTACAAAATATCCATAAGTCTTACCATACTACTGCCCAAAGTATGCATGTTTTGAAGGGTATTGATATGAC
CATAAACGAAGGTGAACTTGTTTCTATTATGGGTTCTTCAGGTTCTGGAAAATCAACATTACTCAATATTTTGGGAATGT
TAGATAATTATGACGAAGGAGAATACTGGCTAGATAAAGTATTAATAAAAAACCTTTCTGAAAAACAAGCAGCTATTTAT
CGCAACAAATTTTTAGGGTTTGTTTTTCAATCTTTCAATTTACTTTCCTTCAAAACAGCAGCCGAAAATGTAGCTTTACC
ACTTTATTATCAAAAAGTAGGACGCAAAGAAAGACAAATACAAGCTGAAGAGTATTTAGAACGTGTAGGTTTACGTCAAT
GGGCGCATCATTTGCCTTCTGAGCTTTCAGGTGGGCAAAAACAGCGTGTTGCTATTGCAAGAGCTTTAATCACAGACCCA
AAAGTAATCTTAGCTGATGAACCAACAGGAGCTTTAGATACAAAAACTTCTTATGAAGTAATGGAACTTTTCAAACAAGT
ACATGAAAGTGGAAAAACAATCGTAATTGTAACCCATGAAGATGATATTGCAGCAAAAACAGAACGAGTAATTCGTCTAA
GAGATGGACATATAGAAACTCAAGAAAAAATAGATAAATAA

Protein sequence :
MLSLQNIHKSYHTTAQSMHVLKGIDMTINEGELVSIMGSSGSGKSTLLNILGMLDNYDEGEYWLDKVLIKNLSEKQAAIY
RNKFLGFVFQSFNLLSFKTAAENVALPLYYQKVGRKERQIQAEEYLERVGLRQWAHHLPSELSGGQKQRVAIARALITDP
KVILADEPTGALDTKTSYEVMELFKQVHESGKTIVIVTHEDDIAAKTERVIRLRDGHIETQEKIDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 9e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fleli_2835 YP_006434981.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-55 56
Fleli_2835 YP_006434981.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 7e-37 45
Fleli_2835 YP_006434981.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 6e-37 44
Fleli_2835 YP_006434981.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686946. Protein 8e-28 41