|
Name : Fleli_0174 (Fleli_0174) Accession : YP_006432466.1 Strain : Flexibacter litoralis DSM 6794 Genome accession: NC_018018 Putative virulence/resistance : Virulence Product : helicase, type I site-specific restriction-modification system restriction subunit Function : - COG functional category : - COG ID : - EC number : - Position : 200927 - 203968 bp Length : 3042 bp Strand : + Note : PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family DNA sequence : ATGTACTCCAAAACTAATGAAATCGCTTTAGAAATTGCTATTGAAAAATATCTAGTAGGTATTTCTTCCGAAGAATTGAA AACAAATGAAACTCATCATACAGATAATTTGTATGGTGGCGACCATTTTTATAGTGGAAAAAGTATAGATTTTAATAAAC GCTATGCTATTGATGAACATCGTTTTTGGCATTTTTTGGAAAACACACAAGAAGAAGAACTCAAAAAATTACAGCGTTCT GCCGATTGGAAACTAAAAATAATGGAGCGTTATGACCGTACCGTAAAAAAATACGGTTTGTTGCGTGTTTTGCGTAAAGG ATTAGATGTAGAAGACGCTCATTTTACTTTCTTTTATCAATATCCGTTGGTAAGTAGTAGCCAGTCGGTAAAGGATAATT TTGAAAAAAATGAATTTAGTCTTACTCGTCAGCTTCATTACAATTCGGACAAACCAGCCGAATCCATAGACATTGTTTTG TTTGTCAATGGTTTGCCTATTTCTACTATTGAACTCAAAAACCCTTGGACAGGACAGACAGCAAAAGTAGAAGGCATTCG TCAGTACCAAAAAGACAGAGATACAAATCAGCCTTTGCTTAATTTTGGTAGATGTTTGGTTCATTTTACGCTAGATACTG ATGAGGCGTATATGACAACAAAATTAGTAGGCGAAAAAACATTTTTTCTTCCTTTCAATAAAGGAAACAATAACGGAAAA GGAAACCCAGTCAATCCAAATGGACATAAAACGGCTTATGTTTGGGAAGAGGTTTATACTCGTAAGAGTTTGGCAAATAT CATTCAACATTTTGTCCGTTTTGATGGAAAATCTACTGATGCACTAAGCAAAAGAACGTTGTTTTTTCCACGTTATCATC AAATGGACGTAGTAAGAAAAATTGTACAAGACACCACACAAAAAGGAGTAGGCAAAACCTATTTGATTCAGCATTCAGCA GGCTCTGGAAAGTCTAATTCAATTACATGGTTAGCTTATCAGCTTATAGAAGTCTATCCGACCGAAAGCACAAACTCTAT TGAGCGTCCGTTATTTGATTCTGTAATTGTAGTAACAGATAGACGTTTATTAGACAAACAGCTTCGCCAAAACATCAAAG AATTTTCGGAAGTCAAAAATATTGTCGCTCCTGCTTTTTCCTCAAAAGAATTGAGAGAAAGTTTAGAACAAGGAAAGAAA ATTATCATTACAACGATACAAAAATTCCCTTTTATCATTGATGGAATAGCAGATTTGAGTAAAAGTCGTTTTGCTGTAAT TATTGATGAAGCGCATAGTTCACAAGGAGGTTCGACAGCAGGAAAAATGAATGCTGCGATGGGAAGTTCAGAGGAAAACA GCAATGAAGACAGCGAAACAGAGGACATTCAAGACAAAATCGTAAAAGCGATGCAGGCTCGTAAAATGAAAGGCAATGCT TCTTATTTTGCTTTCACAGCCACGCCAAAAAACACGACTTTAGAGAAGTTTGGAGAATTACAAACTGATGGTTCTTTCAA GCCTTTTCATTTGTACTCAATGAAACAAGCGATTGAAGAAGGATTTATTTTAGATGTAATTGCAAATTATACGACGTATC AAAGTTATTACGAAATTCAAAAATCTATTGAAGACAATCCTTTATTTGATACCAAAAAGGCGCAGAAAAAACTAAAAGCA TTCGTAGAAACAGATAAACGAACCATTAATACAAAAGCAGAAGTAATTTTTGAGCATTTTATGAGTCAAGTAGTCAATAG AAAAAGACTCAAAGGAAAAGCAAAAGGAATGGTCATTACTCAAAATATAGAAACGACTGTTCGTTATTATACTGCTCTGA AAAGAATTTTAGAAGAAAAAGGAAATCCATTTAAAATAGTGGTTGCTTTTTCAGGAAAAAAAGAAGTTGATGGTATCGAA CAGACAGAAACATTATTAAATGGTTTTTCCGAATCTGATACAAGAGAAAATTTTGATACTGATGAGTATAGATTATTGGT TGTAGCCAATAAATATTTGACAGGTTTTGACCAGCCTAAATTGTGTGTTATGTATGTTGATAAAAAACTACAAGGCGTTT TGGCAGTTCAAGCACTTTCTCGTATCAATAGAGCAGCCAGTAAGTACGGCAAAAAAACAGAAGATTTGTTTGTTTTAGAT TTTTTCAACTCTATTGTAGATATAAAAGCATCTTTTGACCCTTTTTATACTTCCACTACACTAAGTGAAGCCACAGATAT AAATGTTTTACACGAACTCAAATCTAGTCTTGATGAAGTAGGTGTTTATGAAACAAGTGAAATAGAAGAGTTTGTAGAAA AATTCTTTCAAGGCAAAGATGCACAAGGGTTAAGTCCGATTATAGACACAGCAGCTGCTCGTTTTAATGAAGAATTGGAA CTAGAAGACAAAGAAAAAGCAGATTTTAAAATTAAAGCCAAACAGTTTGTAAAAGTATATGGACAAATTTCTTCTATCAT TCCGTATGAAATGGTTGCTTGGGAAAAACTATTTTGGTTTCTCAAATTCTTAATTCCTAAACTTATCATCAAAACAAAAG ATGATGACATTATAGATGAGCTTTTAGAATCAGTTGATTTATCTACGTATGGATTAGAGAGAAAAACATTAAGTCATTCC ATTGTTTTAGATGATGAAGAGTCAGAACTAAAACCTCAAAATGCAAATCCTAGAGGAGCGCATGACAGTGAAGATGAACA TGATTTATTAGATGAGATTATCAATACTTTCAATCAAAGATGGTTTCATGGGTGGAATGTAACACCAGAAGACCAACGAG TAAAGTTTGTAACTCTTAGCAAACATGTACAAGCTCACCCAGACTTTGAAACAAAAGTAGCCAACAACAAAGACATACAA AATAGAGAAATTGCTTTTCAAAAAATCTTAGAGGAAGTAATGATGCAACAGCGCAAAAAAGAGTTGGATTTATACAAACT CTACACACAAGATGATTCTTTTAGACAAGCCTTTTTTGATACTATGAAACAAATGATGGGTAATTCTTCATCTTCTTTGT AG Protein sequence : MYSKTNEIALEIAIEKYLVGISSEELKTNETHHTDNLYGGDHFYSGKSIDFNKRYAIDEHRFWHFLENTQEEELKKLQRS ADWKLKIMERYDRTVKKYGLLRVLRKGLDVEDAHFTFFYQYPLVSSSQSVKDNFEKNEFSLTRQLHYNSDKPAESIDIVL FVNGLPISTIELKNPWTGQTAKVEGIRQYQKDRDTNQPLLNFGRCLVHFTLDTDEAYMTTKLVGEKTFFLPFNKGNNNGK GNPVNPNGHKTAYVWEEVYTRKSLANIIQHFVRFDGKSTDALSKRTLFFPRYHQMDVVRKIVQDTTQKGVGKTYLIQHSA GSGKSNSITWLAYQLIEVYPTESTNSIERPLFDSVIVVTDRRLLDKQLRQNIKEFSEVKNIVAPAFSSKELRESLEQGKK IIITTIQKFPFIIDGIADLSKSRFAVIIDEAHSSQGGSTAGKMNAAMGSSEENSNEDSETEDIQDKIVKAMQARKMKGNA SYFAFTATPKNTTLEKFGELQTDGSFKPFHLYSMKQAIEEGFILDVIANYTTYQSYYEIQKSIEDNPLFDTKKAQKKLKA FVETDKRTINTKAEVIFEHFMSQVVNRKRLKGKAKGMVITQNIETTVRYYTALKRILEEKGNPFKIVVAFSGKKEVDGIE QTETLLNGFSESDTRENFDTDEYRLLVVANKYLTGFDQPKLCVMYVDKKLQGVLAVQALSRINRAASKYGKKTEDLFVLD FFNSIVDIKASFDPFYTSTTLSEATDINVLHELKSSLDEVGVYETSEIEEFVEKFFQGKDAQGLSPIIDTAAARFNEELE LEDKEKADFKIKAKQFVKVYGQISSIIPYEMVAWEKLFWFLKFLIPKLIIKTKDDDIIDELLESVDLSTYGLERKTLSHS IVLDDEESELKPQNANPRGAHDSEDEHDLLDEIINTFNQRWFHGWNVTPEDQRVKFVTLSKHVQAHPDFETKVANNKDIQ NREIAFQKILEEVMMQQRKKELDLYKLYTQDDSFRQAFFDTMKQMMGNSSSSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 65 |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 65 |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Fleli_0174 | YP_006432466.1 | helicase, type I site-specific restriction-modification system restriction subunit | VFG1098 | Protein | 0.0 | 65 |
