Gene Information

Name : Fleli_0172 (Fleli_0172)
Accession : YP_006432464.1
Strain : Flexibacter litoralis DSM 6794
Genome accession: NC_018018
Putative virulence/resistance : Virulence
Product : type I restriction-modification system methyltransferase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 197238 - 199592 bp
Length : 2355 bp
Strand : +
Note : PFAM: N-6 DNA Methylase; HsdM N-terminal domain

DNA sequence :
ATGGATACTGCTACACATAATAAATTAGTTGCTTTTATTTGGTCTATTGCTGACGATTGTCTTCGTGATGTCTATGTACG
AGGAAAATACCGTGATGTAATTTTGCCAATGGTGGTTTTGAGAAGACTTGATGTTTTATTAGAACCTACAAAAGATGCTG
TTTTAGAAGAAGTTAGATTTCAAACAAAAGAACTTGAATTTACAGAACTAGACCCTGCTGGACTTAAAGATGCAAGCAAA
TATGTATTTTATAATACAAGCAAATGGACTCTACAATCACTAAAAGAAACGACAACAAATAGCAAACAAATCATTCAAGC
AAATTTTGAAGAGTATCTAAATGGATTTAGCGAAAATGTAAAAGAAATTATAGATAAATTTAATCTCAAAAATCAAGTGC
AACACATGATTTCAAAAGATGTGTGGCTAGATGTTTTGGAAAAATTTACTTCTAAAGATATAAATCTCACACCTTTCGAA
ACCGAAGATTCAGAAGGAAGAAAACAACCTCCTCTTTCAAATCTAGGTATGGGATATGTTTTTGAAGAACTTATCAGAAA
ATTTAATGAGGAAAACAACGAAGAAGCAGGAGAGCATTTTACACCTCGTGAAGTAATTGACCTCATGACACACCTTGTTT
TTGAGCCTATCAAAGATAATTTACCCTCTGTAATGACCATTTATGACCCTGCGTGTGGTTCTGGGGGAATGCTGACCGAA
TCTCAAAATTTTATTCAAGATGAAGAAGGCACAATAAAAGCTACTGGTTCTGTTTATCTCTATGGAAAGGAAATAAACGA
CGAAACGTATGCGATTTGTAAATCGGATATGATGATTAGGGGAAATAGTCCTGAAAATATTCGTGTTGGTTCTACGCTTT
CTACTGATGAGTTTGCAGGAACACAGTTCAATTATATGCTTTCCAACCCTCCCTACGGCAAGTCGTGGGCTTCCGAACAA
AAATACATCAAAGACGGAAAAGAAGTTATTGATAGTCGTTTTATCGTTCAGTTAAACAACTACTGGGGAGAATCCGAAAC
TGTAGAAGCCGTTCCTCGCTCTTCTGATGGACAGCTTTTGTTTTTGATGGAAATGGTAAGCAAAATGAAACCCAATAATG
AGCAAACAAACGGCTCTAGAATTGCATCTGTTCATAATGGTTCTAGTCTTTTTACTGGAGATGCTGGAGGAGGAGAAAGT
AATATCAGGCGTTACATTATTGAAAATGATATGCTAGAAGCTATTATTCAACTTCCAAACAATCTTTTCTACAATACAGG
CATTACAACCTATATATGGCTTTTGAGTAATGCAAAACCTCAAAACAGAAAAGGAAAAGTACAGCTCATTGATGCCTCAC
AACAGTTTACGAAACTTCGTAAAAACTTAGGTGCGAAAAATTGTGAACTTACAGCTGAACACATAAACGAAATTCTGAAT
GTTCATCTAAATTTTGAAACAACAGAACCAAGCCAAGACAAACCCACTTCAAAAGTATTTGATAATAAAGATTTTGGGTT
TTATAAAGCAACCATTGAAAGACCAAAAAGACTAAAAGCACAATTTTCAGAAGAAAAAATAAATCTACTTCGTTTTGATA
AAACTCTTCTTGAACCAATGCAATGGGCGTATCAAGAGTATGGAGAAGAAATTTATACCCAACTCAAAGAAGACAAAACA
ATAAAAGAAAAAATCATAAAATGGACAGAAGAAAACGGAATTGACCTCAATTCTAAAAAAAGAAATCTGCTTACTTCTCC
CAAAACATGGAATAAATACAAAACTATTCTTGAAGCTGCTCAAAAACTAATGCAACTCATCGGAATAGAAGAATACAATG
ATTTTAATGTTTTTCAGAAAGAAGTAGAAAAGCAAATCAAAGAACATAAAATGACTTTGTCTTCTTCTGAAAAAAATGCT
ATCTACAATGCCATTACGTGGTACGACCAGACAGCCGAAAAAGTCATCAAAAAAACGCAAAAACTAAACGATGAAAAACT
AGACGAGCTTTTAGAAAAACTAGATTGTACAGAACAACAACTTTCTGATTATGGATATTATGCCACCAGCAAAAAAGGCG
AATATATCATTTATGAAACCGAAAGCGATTTGAGAGATTTTGAAAATATACCTCTCAAAGACAATATCTATGTTTACTTT
TTAGAAGAAGTAAAACCACACGTAGAAGAAGCGTGGATTGACTTGGAAAAAACTAAAATTGGTTATGAAATCAGTTTTAA
TAAATATTTCTATCAGCATAAACCCCTGCGAAATATAGAAGAAGTCAGTAAAGAAATACTACAACTAGAAAAACAAAATG
AAGGATTAATCTTAGAAATTCTAAATTTAAGCTAA

Protein sequence :
MDTATHNKLVAFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDVLLEPTKDAVLEEVRFQTKELEFTELDPAGLKDASK
YVFYNTSKWTLQSLKETTTNSKQIIQANFEEYLNGFSENVKEIIDKFNLKNQVQHMISKDVWLDVLEKFTSKDINLTPFE
TEDSEGRKQPPLSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIDLMTHLVFEPIKDNLPSVMTIYDPACGSGGMLTE
SQNFIQDEEGTIKATGSVYLYGKEINDETYAICKSDMMIRGNSPENIRVGSTLSTDEFAGTQFNYMLSNPPYGKSWASEQ
KYIKDGKEVIDSRFIVQLNNYWGESETVEAVPRSSDGQLLFLMEMVSKMKPNNEQTNGSRIASVHNGSSLFTGDAGGGES
NIRRYIIENDMLEAIIQLPNNLFYNTGITTYIWLLSNAKPQNRKGKVQLIDASQQFTKLRKNLGAKNCELTAEHINEILN
VHLNFETTEPSQDKPTSKVFDNKDFGFYKATIERPKRLKAQFSEEKINLLRFDKTLLEPMQWAYQEYGEEIYTQLKEDKT
IKEKIIKWTEENGIDLNSKKRNLLTSPKTWNKYKTILEAAQKLMQLIGIEEYNDFNVFQKEVEKQIKEHKMTLSSSEKNA
IYNAITWYDQTAEKVIKKTQKLNDEKLDELLEKLDCTEQQLSDYGYYATSKKGEYIIYETESDLRDFENIPLKDNIYVYF
LEEVKPHVEEAWIDLEKTKIGYEISFNKYFYQHKPLRNIEEVSKEILQLEKQNEGLILEILNLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 66
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 66
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fleli_0172 YP_006432464.1 type I restriction-modification system methyltransferase subunit VFG1102 Protein 0.0 66