Gene Information

Name : Fleli_1429 (Fleli_1429)
Accession : YP_006433649.1
Strain : Flexibacter litoralis DSM 6794
Genome accession: NC_018018
Putative virulence/resistance : Virulence
Product : nucleoside-diphosphate-sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1685739 - 1686737 bp
Length : 999 bp
Strand : -
Note : PFAM: NAD dependent epimerase/dehydratase family

DNA sequence :
TTGGAACAAAATAAACTCACTTCAAAAAAAATTCTCATTACAGGAGGAGCTGGATTTATCGGTTCAAATCTGTGTGAAAA
ATTTTTAGCACAAAATAATACAGTTATTTGTCTTGATAATTTTTCGATGGGAAGAAGAGAAAATATAGAACATCTCTTAG
AAAACCCAAATTTTACACTCATAGAAGGCGATATTCGTAAATTAGAAGATTGTAAAAAAGCTGTTGTTGGCGTGGAAGTT
ATCTTGCATCAAGCTGCATTAGGTTCTGTTCCTCGTTCGATTGCTGACCCAATTACTTCAAATGATGTAAATATTTCGGG
GTTTGTAAATGTATTAGTGGCTGCAAAAGAAGAAGGTGTAAAAAGAATTGTTTATGCTGCTAGTTCTTCTACTTATGGAG
ACCACAAAGCACTTCCAAAAATAGAGGAAAATATCGGTCGCCCTCTTTCGCCTTATGCTGTTACAAAATATGTAAACGAA
CTCTATGCAAATGTTTTTTCAGATTTGTATGGTTTGGAAATTATTGGGCTGCGTTATTTTAATGTTTTTGGAAGAAAACA
GCGTCCTGATGGTGCGTATGCTGCCGTTATTCCAAAGTTTATTGGACTTTTGATGGAACATGAACGACCTACTATTTTTG
GAGATGGCGAATTTTCAAGAGATTTTACTTATATAGAAAACGTCTTGCAAGCCAATGAGTTAGCAGCCACAACAACAAAT
CTAGAAGCAATAAATCAAGTATATAATGTAGCTTTTGGAGAGCGTACAACAGTAACAGAAATGTTTGAACTTATGCGCTC
ACTTTTGAGCAAGTATGATTCTAAAATTTCAGAAGTAGAGGCAATTTATGGAGATAATCGACAAGGTGATATTCCTCATT
CCTTAGCCTCCATTGAAAAAGCTAAAAATTTATTAGGCTATAATCCTCAATATTCTTTCAAAAAAGGACTTACAGAAGCT
ATTGAATGGTACTGGAAAGATTTGACAATGGAAAAATAA

Protein sequence :
MEQNKLTSKKILITGGAGFIGSNLCEKFLAQNNTVICLDNFSMGRRENIEHLLENPNFTLIEGDIRKLEDCKKAVVGVEV
ILHQAALGSVPRSIADPITSNDVNISGFVNVLVAAKEEGVKRIVYAASSSTYGDHKALPKIEENIGRPLSPYAVTKYVNE
LYANVFSDLYGLEIIGLRYFNVFGRKQRPDGAYAAVIPKFIGLLMEHERPTIFGDGEFSRDFTYIENVLQANELAATTTN
LEAINQVYNVAFGERTTVTEMFELMRSLLSKYDSKISEVEAIYGDNRQGDIPHSLASIEKAKNLLGYNPQYSFKKGLTEA
IEWYWKDLTMEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 5e-79 56
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 5e-79 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fleli_1429 YP_006433649.1 nucleoside-diphosphate-sugar epimerase VFG0430 Protein 2e-79 56