Gene Information

Name : Fleli_1211 (Fleli_1211)
Accession : YP_006433441.1
Strain : Flexibacter litoralis DSM 6794
Genome accession: NC_018018
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1413374 - 1414627 bp
Length : 1254 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence :
ATGACATATAAATTAGCAATTATTGGTTTGGGATATGTAGGTTTGCCATTGGCTGCTGAGTTTGGTAAAAAATATTTTAC
TATTGGTTTTGATATTAATAAAAATCGTATCGAAGAACTCAAAAAAGGATATGACCGAACTCTTGAAGTAAATAAAGAAG
AGCTGAAAGCATCAGAGCATCTTTCTTTTACAACCAGCCTTGAAAAACTTGCCGAAGCCTCAATTTATATCGTAACCGTT
CCTACGCCTGTGGATGTGTACAAAAAACCAGATTTGAAACCAATTCTGGCAGCTTCAAAAACAGTTGGAAAGGTTCTCAA
AAAAGGAGATATTGTAGTCTATGAATCGACAGTTTATCCAGGTTGTACAGAAGAAGATTGTGTTCCTATTTTAGAAAAAG
AAAGTGGTTTAAAATTTAATCAAGATTTCTTTTGTGGATATTCTCCTGAGCGAATTAATCCAGGGGATAAAGAACATACA
ATTTCTAAAATAAAAAAAGTAGTTAGTGGAAGTACACCTAAAATTGCACAGCAATTAAATGAACTTTATGGCTCAATTAT
CACAGCAGGAACTCATCTTGCTTCTTCTATAAAAGTAGCCGAAGCCTCAAAAGTTATCGAAAATGCACAGCGTGATTTGA
ATATTGCTTTTGTAAACGAACTCGCACTTATTTTTGAGAAAATGGATATTGATACATTGGAAGTTTTGGAAGCAGCAGGT
ACAAAATGGAATTTTTTACCGTTTAAACCTGGATTAGTGGGTGGACATTGTATAGGAGTTGATCCTTATTATCTGACTTA
CAAAGCCGAAAGTTTGGGTTATCATCCAGAGGTAATTTTGGCAGGAAGAAGAATTAATGATACAATGGGAGTTTTTGTTG
CTTCAAAAGTTATCAAATTGATGATTCAACAAAGCACAAATGTAAAAAACGCAAAAATTTTAGTTTTGGGGATTACTTTT
AAAGAAAATTGCCCTGATATTCGTAATTCAAGAGTGATTGATGTAATTAGAGAATTTCAAGATTTTGGTGCAAATGTAGA
AGTTTATGACCCTTGGGCAGATGCAGCCGAAGTAAAACACGAATATAATCTTGATTTGATAAAAGAACCTTCTCAAAATT
ATGATGCTATCGTTTTGGCAGTTTCTCATAAAGAATTTGATTCCTTAGACTTTGAAAATCTTAAAAATGAAAAAACAATT
ATCTATGATATTAAAGGAAAAATTGACAAATCTAAGGTAACAGCGAGGCTATAA

Protein sequence :
MTYKLAIIGLGYVGLPLAAEFGKKYFTIGFDINKNRIEELKKGYDRTLEVNKEELKASEHLSFTTSLEKLAEASIYIVTV
PTPVDVYKKPDLKPILAASKTVGKVLKKGDIVVYESTVYPGCTEEDCVPILEKESGLKFNQDFFCGYSPERINPGDKEHT
ISKIKKVVSGSTPKIAQQLNELYGSIITAGTHLASSIKVAEASKVIENAQRDLNIAFVNELALIFEKMDIDTLEVLEAAG
TKWNFLPFKPGLVGGHCIGVDPYYLTYKAESLGYHPEVILAGRRINDTMGVFVASKVIKLMIQQSTNVKNAKILVLGITF
KENCPDIRNSRVIDVIREFQDFGANVEVYDPWADAAEVKHEYNLDLIKEPSQNYDAIVLAVSHKEFDSLDFENLKNEKTI
IYDIKGKIDKSKVTARL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-122 61
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-122 61
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-109 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fleli_1211 YP_006433441.1 nucleotide sugar dehydrogenase VFG0431 Protein 3e-122 61