Gene Information

Name : Fleli_1200 (Fleli_1200)
Accession : YP_006433430.1
Strain : Flexibacter litoralis DSM 6794
Genome accession: NC_018018
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1401636 - 1402424 bp
Length : 789 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
TTGATAACACAAGTAGAAAACCCAGTTTTAGAAATCCATGACCTTACGGTTAGTTATGAGCGCAAACCTGTACTTTGGAA
TATTGATTTATCAATTCCAAAAGGTTCTTTAGTGGGAATAATTGGCCCTAATGGCGCAGGAAAATCAACACTTATAAAAG
CTGTAATGGGACTTTTGCCGTTGAGTAGTGGATATGTCAAGTTATTAGACAAAAATCTTAATGAAGTTAGAGATAAAATA
AGTTATGTTCCTCAGCGAGAATCTGTCGATTGGGACTTTCCAATTTCTGTTTTTGAAGTTGTCTTGATGGGAAGATATGG
AAAAATGGGTTTGATGCGTCGCCCTTCCAAAAAAGATAAAGAAGTTGCTTTACAATCTTTGGAGCAGGTCGGAATGAGTG
CTTTTGCCTCTCGTCAGATTTCACAGCTTTCTGGAGGACAGCAACAGCGTGTTTTTTTGGCTAGAGCTTTGGCACAAGAA
GCTGATTTATATTTGATGGATGAGCCTTTTGTAGGAGTTGATGCAGCCACAGAATCAGCCATTATCACGCTTTTAAGAGA
TATGAGAGCAGCAGGAAAAACAGTTATTGTTGTTCATCATGATTTGCAATCAGCAGCCGAATATTTTGACTGGGTCGTTC
TTTTGAATATGCGTTTGGTAGCAAGTGGAGAAACAAAAACTACACTTACACCATCTCTTTTAGAAGAAACATATGGAGGA
AGATTGACCGTTTTGTCAGAAGTAGGAGAATTATTAAAAAAAGCTCAATTTCCTTCAAGAGAGGATTGA

Protein sequence : 
MITQVENPVLEIHDLTVSYERKPVLWNIDLSIPKGSLVGIIGPNGAGKSTLIKAVMGLLPLSSGYVKLLDKNLNEVRDKI
SYVPQRESVDWDFPISVFEVVLMGRYGKMGLMRRPSKKDKEVALQSLEQVGMSAFASRQISQLSGGQQQRVFLARALAQE
ADLYLMDEPFVGVDAATESAIITLLRDMRAAGKTVIVVHHDLQSAAEYFDWVVLLNMRLVASGETKTTLTPSLLEETYGG
RLTVLSEVGELLKKAQFPSRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-50 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-50 44
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-50 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-51 44
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-50 44
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-44 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-44 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fleli_1200 YP_006433430.1 Mn/Zn ABC transporter ATPase BAC0400 Protein 3e-72 59
Fleli_1200 YP_006433430.1 Mn/Zn ABC transporter ATPase BAC0440 Protein 1e-51 48
Fleli_1200 YP_006433430.1 Mn/Zn ABC transporter ATPase BAC0350 Protein 6e-51 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fleli_1200 YP_006433430.1 Mn/Zn ABC transporter ATPase VFG0526 Protein 6e-51 44