Gene Information

Name : Desde_4233 (Desde_4233)
Accession : YP_006432284.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4304472 - 4304885 bp
Length : 414 bp
Strand : -
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence : 
ATGTTGAACCGCGTCGTTTTAATAGGCCGTTTAACGAAAGACCCCGAGTTACGTTATACCCCGAATGGAGTTGCTGTAGC
CAGCTTTACATTAGCTGTAGATCGCAATTTCAAGAATGCCAACGGGGAACGGGAAGCGGATTTTATTCCATGTGTAGTAT
ATAGACAACTGGCTGAGCTCTGTGCGAATTATCTTTCCAAAGGTAAATTAGCAGCTGTCGACGGGCGGCTGCAAGTTCGT
ACTTATGATGCTCAAGATGGGCAACGCCGTTGGGTTTATGAGGTCGTCGCTGAGAATGTGCGCTTCCTCAGTCCCAAAGA
TGGCGGAAATTCCGGATATGGAGCATCTTCAGGAGCCAGTGACGTGGGGACTTATGGTCATGAAGTAAGCTTAGATGACG
ATATCCCATTCTAA

Protein sequence : 
MLNRVVLIGRLTKDPELRYTPNGVAVASFTLAVDRNFKNANGEREADFIPCVVYRQLAELCANYLSKGKLAAVDGRLQVR
TYDAQDGQRRWVYEVVAENVRFLSPKDGGNSGYGASSGASDVGTYGHEVSLDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-31 69
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-31 69
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 7e-32 69
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 8e-31 67
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 3e-30 64
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 4e-25 62
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 3e-26 58
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 5e-26 58
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 5e-16 44
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 7e-16 44