Gene Information

Name : Desde_4227 (Desde_4227)
Accession : YP_006432278.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Unknown
Product : primary replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.1.-
Position : 4298976 - 4300310 bp
Length : 1335 bp
Strand : -
Note : PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase

DNA sequence :
ATGGAACTTACCAGAGTTCCCCCCCATAATTTAGAGGCGGAACAATCGGTTTTAGGCGCATTAATGCTTGATCCGGAAGT
GGGGAGTTCCGTTTTTGAAGTATTGCAACCCGAGGATTTTTATCGGGATAATCACCGCCAGGTCTTTCTTGCACTACGAG
ATCTCTTTGAAAAGGGAGATCCGATTGACTTAGTTTCCGTAGCGGAAAGTCTTCGTCAAAGCGGGCGGCTTGAACAAATC
GGTGGTATTGCTACCATTTCCCAAATCGCTCGCTCTGTTCCTTCTGCAGTAAACTGTGAGTATTATGCCAGGATTGTAGC
GGAGAAATCCCTATTACGCCAACTCATTCGCAGTACCGGACAAATTGCGGAGAAAGGCTATGAACCGGGAGAAGCCGCCA
CATCTTTATTGGAAGAAGCCGAAAAAGTAATTATGGATCTTTCTCAGAGACAGGTGAAGGACGGCTTCGAATCCATCCGT
AATATCTTGGTCAATACCTTTGAAAAAATCGAAACCCTCTATGCCAATAAAGGGAGTCTGACGGGAGTTCCTACCTTTTT
TACGGAACTGGATCGTATGACATCCGGCTGGCAGCCCTCGGATCTGATTGTTATTGCCGCCCGTCCCTCCATGGGTAAAA
CGGCCTTGGTACTGAATATGGCCCAAAATGCTGCGGTAAGGGCGAATGTTCCGGTAGCTCTCTTCAGCTTGGAAATGTCC
AAGGAACAACTAGTTCAACGTATGCTTTGTTCGGAAGCTATGGTGGATCAACAAAGAGTCCGTACAGGAGATCTACTGGA
CACGGACTGGCCTAAGCTTACACGAGCGGTAGGCCCTCTCTCCGAAGCTGAGATTTTTATTGATGATACCGTAGGGATTT
CCCTTGCTGAATTACGCTCCAAAGCAAGACGGTTGAAAATGGAGCACGGTCTCGGGCTGATTGTCATCGATTACCTGCAG
CTCATGTCTTTAGGAAGACGAGCGGAAAGTCGTCAGCAGGAAGTTGCTCAGATCTCCCGAGGGCTCAAAGGGATTGCCCG
GGAATTGAATGTTCCGGTCATTGCCCTTTCTCAGCTCAACCGGGGGGTAGAACAACGTCAGGATAAGCGGCCGATTATGT
CCGACTTATTAGAATCCGGTGCCATTGAGGCGGATGCCGATGTCATCTCCTTTATTTATCGGGATGAATACTATAACCCT
GAATCGGATAAAAAGGGAATCGCCGAAATCATCATCGGCAAGCATCGGAACGGACCGGTGGGATCGGTAGAACTGGGGTA
CCTCAAAGAGTTTACAAAGTTTGTGAACCTGGATCGTCAGCATCTTTCAGCCTAA

Protein sequence :
MELTRVPPHNLEAEQSVLGALMLDPEVGSSVFEVLQPEDFYRDNHRQVFLALRDLFEKGDPIDLVSVAESLRQSGRLEQI
GGIATISQIARSVPSAVNCEYYARIVAEKSLLRQLIRSTGQIAEKGYEPGEAATSLLEEAEKVIMDLSQRQVKDGFESIR
NILVNTFEKIETLYANKGSLTGVPTFFTELDRMTSGWQPSDLIVIAARPSMGKTALVLNMAQNAAVRANVPVALFSLEMS
KEQLVQRMLCSEAMVDQQRVRTGDLLDTDWPKLTRAVGPLSEAEIFIDDTVGISLAELRSKARRLKMEHGLGLIVIDYLQ
LMSLGRRAESRQQEVAQISRGLKGIARELNVPVIALSQLNRGVEQRQDKRPIMSDLLESGAIEADADVISFIYRDEYYNP
ESDKKGIAEIIIGKHRNGPVGSVELGYLKEFTKFVNLDRQHLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-77 43
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 7e-69 43
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-71 42
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-70 42
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 9e-66 42
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 9e-66 42
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 5e-69 41