Gene Information

Name : Desde_4087 (Desde_4087)
Accession : YP_006432141.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Virulence
Product : Fe-S-cluster-containing hydrogenase subunit
Function : -
COG functional category : -
COG ID : -
EC number : 1.8.-.-
Position : 4168604 - 4169209 bp
Length : 606 bp
Strand : -
Note : PFAM: 4Fe-4S binding domain

DNA sequence : 
GTGACCGAACAGCCGATTCGTTACGGCATGGTCATTGATTTGCGGAAATGTGTGGGCTGTAATGCCTGCACCGTTTCCTG
CAAAATCGAGAACAATGTGCCGGATGGAAAATACCGTACCTGGGTCAAGGAAATCGAAAAGGGAACCTATCCGGAAGTAT
CCCGCCATCGCTTGCCCCGCTTATGCAATCATTGTGATAATGCCCCTTGTAAGTCAGCCTGCCCCGTCCGGGCCACCTAC
CGGACGGAAGATGGTACTATTCTTATCGATTATGAGCGCTGTATTGGCTGTAAATACTGTATGGCCGCCTGTCCCTATGA
CGCCCGCTTTGTTAACCCGGTCCGCAAAACCGCGGAGAAATGCACCTTCTGCTATCACAGAGTCCAAATGGGGCTGCTGC
CGGCTTGTGTCACCACCTGTGTAGGGGGAGCCCGAATCTTTGGAGATTTGAATGATCCCGACAGTCTCGTCTCCAGGCTT
ATCGCCAATAACCCTGTACAAGTTCTCAAGCCGGAGATGAATACCCGGCCTATGATTTACTACATCGGTGCTGAACAGGC
CCTGCTGGGAGCAGACTATACAGATTTAGCAAAGGGGGAGAAATAA

Protein sequence : 
MTEQPIRYGMVIDLRKCVGCNACTVSCKIENNVPDGKYRTWVKEIEKGTYPEVSRHRLPRLCNHCDNAPCKSACPVRATY
RTEDGTILIDYERCIGCKYCMAACPYDARFVNPVRKTAEKCTFCYHRVQMGLLPACVTTCVGGARIFGDLNDPDSLVSRL
IANNPVQVLKPEMNTRPMIYYIGAEQALLGADYTDLAKGEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 7e-52 53
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 7e-52 53
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 1e-51 53
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 1e-51 53
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 9e-52 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_4087 YP_006432141.1 Fe-S-cluster-containing hydrogenase subunit VFG0486 Protein 4e-52 53