Gene Information

Name : Desde_4006 (Desde_4006)
Accession : YP_006432061.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4072659 - 4073363 bp
Length : 705 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGACTCTTTTGCTTGAAGGAAAAGGTATCCGCAAGGTTTATCAAACCGGAGAGGTTGAATTGGAGGTCCTGAAAGGGCT
GGATTTTCAAATCTTCACCGGTGAATTTATCGTAATCCTTGGTCAAAGCGGGTCCGGGAAAACCACCCTTCTTAATATCA
TTGGCGGCATGACTCCTCCCACCTCAGGGGAACTGTATTACCGCGACGAGCCCTTGCATGACGCAGATGATTCGGGACTG
ACCTTTTATCGGCGTCAAGCCGTTGGTTTTGTCTTTCAGCACTACAATTTGATGCCCAATCTTACAGCCTTTGAAAATAT
TTGGCTGGCCGCCGAAATCGCTGAAGACCCCCTGTCTGTGGATGAAGTGCTTCAGGATGTGGGACTGGAACCATGGGCAG
AACATTTTCCTTCCCAGCTCTCCGGTGGGCAGCAGCAGCGGGTGGCCATTGCCCGTGCTATTGTTAAAAACCCTGCCTTG
CTTCTTTGTGATGAACCTACCGGGGCTTTGGATATTCAAACGGGTATTCAAGTCTTAAAAGCTTTACAAAAACTCAACCA
TGATTACCACAAAACCATTATTATCATTACTCATAATGGGGAAATTGCCAAGATGGCTGATCGTGTGTTTTTTATCAAGG
ATGGGATGTTGGAAAAAATCCAAGTTAATGAGCATCCTCTCCAACCGGAGGAACTTTTATGGTAG

Protein sequence : 
MTLLLEGKGIRKVYQTGEVELEVLKGLDFQIFTGEFIVILGQSGSGKTTLLNIIGGMTPPTSGELYYRDEPLHDADDSGL
TFYRRQAVGFVFQHYNLMPNLTAFENIWLAAEIAEDPLSVDEVLQDVGLEPWAEHFPSQLSGGQQQRVAIARAIVKNPAL
LLCDEPTGALDIQTGIQVLKALQKLNHDYHKTIIIITHNGEIAKMADRVFFIKDGMLEKIQVNEHPLQPEELLW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-43 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-43 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-43 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_4006 YP_006432061.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 1e-48 51
Desde_4006 YP_006432061.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 4e-43 45
Desde_4006 YP_006432061.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-39 45
Desde_4006 YP_006432061.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-32 43
Desde_4006 YP_006432061.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 4e-40 41