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Name : Desde_3866 (Desde_3866) Accession : YP_006431926.1 Strain : Desulfitobacterium dehalogenans ATCC 51507 Genome accession: NC_018017 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 3902947 - 3904779 bp Length : 1833 bp Strand : - Note : PFAM: Polysaccharide biosynthesis protein DNA sequence : ATGGCTATAGACGCTGTGTTAGTTAACCTCGCAGCGTTTTTAAGCTTTTATATTCGTTTTGCTGTTGATGGGGATGGAAC TATACCTGAGGAGTATCTGCTCACACTGACTCACTCTGCGTGGACAGCCACCCTGATTTATTTAGCCGTGTTTTATGTCT TTGGCTTATATAACAAGCTCTGGCAGTATGCCAGCATCGGGGAGCTACTATCCATTATCTTTGCGGTCACTGTCGCTACA GCAGGGACGGTCACCATGGTGTATTTTATTGCTCCCATGCGTTTTCCCCATACGGTATCCGCCCTTATGTGGTTCAGCAC CCTCTTCTTAATCGGCGGCTCCCGCTTCATCTGGAGAATTCTTCAGGATAATATTTTTACTCCCCATGTACCCGGTTCTC AGAATCAAGTCTTGATCATCGGAGCAGGGGATGCGGGAGTGATGGCAGCCCGGGAGCTAAAAAACAAAAACTACCGCGAA GGCCGTCCTGTGGGCTATATAGACGATGCAGCCACAAAGCAAAGACTCCAGCTCATGGGGATTCCCGTCTTGGGTACCCG CAAGGATATTCCTCGAGTCGTTAAAAACCATAATATTGATAAAATCATTATCGCCATGCCTTCGGTCTCAGGGGAGATTA TCCGGGAGATCGTAGGAATCTGCGAAAAAACCGGTGTGGATCTAAAGATCATGCCTGGAGTGTTCGACGTGGTCAGCGGT AAGGTGGATACCACCGAAATCCGCCAGGTTCAGGTGGAGGATTTACTGGGACGTGAACCCGTTACCGTAGACCTGGAGGA TGTAGCAGGTTATCTCACCGGTGAAGTGGTCCTGATTACCGGTGGGGGCGGGTCCATCGGCTCCGAACTCTGCCGGCAGG TCACCCGCTTCAACCCAGCCAAACTGGTGATCGTAGGTCATGGAGAAAACAGCGTCTTTGACATAGAGCAGGAGCTGCGC TCGGAAAACCCAAGTCTGGATGTAGTCACGGAGATTTTGGATATCAAGGACCAGGAAAAGGTCCATATCGTCTTCCAACG CTATAAACCGGGTGTGGTGTTCCACGCCGCTGCCCATAAACATGTCCCTCTCATGGAAAAGAACCCGGAAGAGGCTCTGA AGAATAATGTGATGGGTACCAGCAATCTGGCCGAGGCGGCTGACGCCGTCAAGGTCAAGACCTTCGTCCTGATCTCCACC GATAAAGCGGTCAATCCCACCAGCATTATGGGGGCTACCAAGCGGGTGGCAGAGATGGTGATACAGAGCATGGACAGGCG TTCCGACACGAAGTACGTTGCGGTACGCTTTGGTAATGTGCTGGGCAGCCGGGGAAGCGTTATTCCCACCTTTAAGCGTC AGATTGCCAAAGGGGGGCCGGTCACAGTAACCCATCCCGATATGGTTCGCTATTTTATGACCATCCCTGAAGCTTCCCAG CTGGTGATTCAAGCCGGTTCCATGGCTCAAGGGGGAGAGATCTTTATTCTTGATATGGGTCAACCGGTTAAAATTCTGGA TCTTGCCCGAGATCTCATCCGTCTCTCGGGGTTTGAGCCGGAAGTTGATATCAAAATTAAATTCACAGGGATGCGCCCTG GTGAGAAACTCTTTGAAGAACTCCTTACCGCAGAAGAAGGGACTTCAGCGACGAAACATAAACGGATTTTTGTGGCTAAA CCCAATAACATTAATGTTTCGCAGCTTGAGGAACTCATTCACCTCATCCGTGAGCGGGGCTCCTATCTCACCCGGGAAGA AGTTATCGGACAGTTACAAGCCATCGTGCCTACATTCAAAAAACAAGCTTCCAAGGCAGTTGCCAATCAATAA Protein sequence : MAIDAVLVNLAAFLSFYIRFAVDGDGTIPEEYLLTLTHSAWTATLIYLAVFYVFGLYNKLWQYASIGELLSIIFAVTVAT AGTVTMVYFIAPMRFPHTVSALMWFSTLFLIGGSRFIWRILQDNIFTPHVPGSQNQVLIIGAGDAGVMAARELKNKNYRE GRPVGYIDDAATKQRLQLMGIPVLGTRKDIPRVVKNHNIDKIIIAMPSVSGEIIREIVGICEKTGVDLKIMPGVFDVVSG KVDTTEIRQVQVEDLLGREPVTVDLEDVAGYLTGEVVLITGGGGSIGSELCRQVTRFNPAKLVIVGHGENSVFDIEQELR SENPSLDVVTEILDIKDQEKVHIVFQRYKPGVVFHAAAHKHVPLMEKNPEEALKNNVMGTSNLAEAADAVKVKTFVLIST DKAVNPTSIMGATKRVAEMVIQSMDRRSDTKYVAVRFGNVLGSRGSVIPTFKRQIAKGGPVTVTHPDMVRYFMTIPEASQ LVIQAGSMAQGGEIFILDMGQPVKILDLARDLIRLSGFEPEVDIKIKFTGMRPGEKLFEELLTAEEGTSATKHKRIFVAK PNNINVSQLEELIHLIRERGSYLTREEVIGQLQAIVPTFKKQASKAVANQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 8e-118 | 49 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-110 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desde_3866 | YP_006431926.1 | nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 5e-114 | 46 |
| Desde_3866 | YP_006431926.1 | nucleoside-diphosphate sugar epimerase | VFG0029 | Protein | 3e-85 | 44 |
