Gene Information

Name : Desde_0374 (Desde_0374)
Accession : YP_006428636.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 388110 - 388790 bp
Length : 681 bp
Strand : +
Note : PFAM: ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnL

DNA sequence : 
ATGGCTGAAGTTCTTAAGATGCAAAATATTTTCAAAAAATACATTATGGGTGAGGAAGAGCTGGAGGTCTTGCATAACGT
TAATTTAGCGGTGAACTCGGGTGAGTTTCTATCGATACTTGGTCCGTCAGGTTCCGGTAAATCGACGATGATGAATATCA
TTGGCTGTCTGGATGTACCGACAGCTGGGGAATATCTGCTTTCTGGCCATAATATTGATGATCTGGATGAAACCGAACTG
GCCGCCATAAGAAATAAGGAAATTGGCTTTGTCTTCCAGAATTTTCAGCTTTTGCCGCGCTTAAGTGCACTTCAAAATGT
AGAACTGCCCTTAATCTATGCGGGCATCCCAGCCACGGAAAGAAAACAAAGGGCAATGAAAATGCTGGAGCAGGTAGGAT
TAGCCGATAAAATGAAAAATCTGCCGAATCAGCTCTCAGGGGGTCAGCAGCAAAGGGTTGCTATTGCACGGGCACTGGTT
ACCGAGCCGACGATTCTCCTGGCGGATGAACCCACAGGCGCCTTAGATCAAAAGACGGGCGCTCAGGTCATGGAGCTTTT
CGAAGAGCTTAACCATGAAGGAAGAACCATTATTATGATTACTCACGATATCGGTATTGCTCGTCACGCCCAACGAGTTG
TCAATATTTTGGATGGTTATTTAACTGAACAGGAGGTGTAA

Protein sequence : 
MAEVLKMQNIFKKYIMGEEELEVLHNVNLAVNSGEFLSILGPSGSGKSTMMNIIGCLDVPTAGEYLLSGHNIDDLDETEL
AAIRNKEIGFVFQNFQLLPRLSALQNVELPLIYAGIPATERKQRAMKMLEQVGLADKMKNLPNQLSGGQQQRVAIARALV
TEPTILLADEPTGALDQKTGAQVMELFEELNHEGRTIIMITHDIGIARHAQRVVNILDGYLTEQEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-30 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_0374 YP_006428636.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-56 58
Desde_0374 YP_006428636.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-41 49
Desde_0374 YP_006428636.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-36 46
Desde_0374 YP_006428636.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-36 42