Gene Information

Name : Desde_3260 (Desde_3260)
Accession : YP_006431344.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3254013 - 3254387 bp
Length : 375 bp
Strand : -
Note : PFAM: Penicillinase repressor

DNA sequence :
TTGAAGGCAATTCCTCAAATTTCAGAGGCAGAACTGGAAGTAATGAAAATACTATGGGAGCTGAAAAGCTGCACCAGCGC
TCAGATCATAGAAAGATTAGCGGAAGTATCGGACTGGAAACCCAAGACCATCCATACTTTGATTACCCGGCTGGTCTCGA
AAGAGGCGGTCAGCGCCGTAAAGATCGATGGTAAATCCTATCTCTATTCACCTAATGTCAGTGAAGAGGAATATAAAAGC
TATGCGAATAAATCCTTTTTACACAAGCTCTATAATGGTTCACTGAATCTCATGCTAGCCAGCTTTATTAAAGAGCAGCA
TCTATCCAAAAGAGAGATAGAAGAACTTAAAAAGATGTTAGATGAGGAGATGTAA

Protein sequence :
MKAIPQISEAELEVMKILWELKSCTSAQIIERLAEVSDWKPKTIHTLITRLVSKEAVSAVKIDGKSYLYSPNVSEEEYKS
YANKSFLHKLYNGSLNLMLASFIKEQHLSKREIEELKKMLDEEM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mecI YP_039517.1 methicillin resistance regulatory protein MecI Not tested Type-II SCCmec Protein 7e-14 42
blaI YP_253677.1 beta-lactamase repressor Not tested ¥ÕSh1 Protein 1e-16 42
mecI YP_190060.1 methicillin-resistance regulatory protein MecI Not tested Type-II SCCmec Protein 5e-16 42
mecI BAA82218.1 methicillin resistance protein MecI Not tested Type-II SCCmec Protein 4e-16 42
mecI NP_373280.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 5e-16 42
mecI NP_370567.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 2e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_3260 YP_006431344.1 transcriptional regulator CP001581.1.gene771.p Protein 7e-24 47
Desde_3260 YP_006431344.1 transcriptional regulator AM180355.1.gene595.p Protein 1e-24 45
Desde_3260 YP_006431344.1 transcriptional regulator NC_002952.2861158.p0 Protein 2e-14 42
Desde_3260 YP_006431344.1 transcriptional regulator NC_005951.2853407.p0 Protein 2e-17 42
Desde_3260 YP_006431344.1 transcriptional regulator NC_010419.6155809.p0 Protein 2e-17 42
Desde_3260 YP_006431344.1 transcriptional regulator NC_002952.2858973.p0 Protein 3e-17 42
Desde_3260 YP_006431344.1 transcriptional regulator NC_010066.5774788.p0 Protein 2e-17 42
Desde_3260 YP_006431344.1 transcriptional regulator NC_003140.1122763.p0 Protein 2e-17 42
Desde_3260 YP_006431344.1 transcriptional regulator NC_005054.2598289.p0 Protein 3e-17 42
Desde_3260 YP_006431344.1 transcriptional regulator NC_005011.2598314.p0 Protein 2e-17 42
Desde_3260 YP_006431344.1 transcriptional regulator NC_002745.1122814.p0 Protein 2e-16 42
Desde_3260 YP_006431344.1 transcriptional regulator NC_002758.1120003.p0 Protein 6e-16 41
Desde_3260 YP_006431344.1 transcriptional regulator NC_009782.5560220.p0 Protein 6e-16 41