Gene Information

Name : Desde_3114 (Desde_3114)
Accession : YP_006431199.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3113205 - 3114101 bp
Length : 897 bp
Strand : -
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC

DNA sequence :
ATGCAAGCCGATCATGCCCTCAGCTTATTCGACGGCCACCTTAAAACCCAAAACCGATCTGAGCATACGCTCATAGCTTA
CCATAATGACCTCATCCAATTCTTTGATTTCGCCGCCCGGGAGTTAGGCGAAGAACCGGAAAAAATAACCGTCGATCAGG
TGGATATATACATCGTTCGCAGTTTCCTTGGGGAAATGACGGACCGGGGCCTGGAGAGAAAAAGCATGGCCCGCAAACTT
TCTGCCTTGAGAGCCTTTTTTAAATTCCTATGCCGGGAAGGAATCCTGCAGAAAAATCCTATTCAGCGCATAGCCACCCC
TAAGTTAGGAAGGAAGCTGCCCCACTTTCTCTCGATAGAAGAACTGGATAAACTGATTCACACTCCTGACTGCACCACAC
TGCTGGGGGCGCGGGATCAGGTGATCCTGGAATTGCTCTACGGATCCGGCTTACGGGTCAGCGAGCTGGCCGATCTTAAT
CGTCAGGATATCGATGAGGGGACTTCCCTTCTTCGGGTTCGCGGAAAAGGAAATAAAGAGAGAATCGTTCCCTTAACCCA
TTACGCCCTGGAAGCCGCCCGGAAGTATCTGAACATGAGAGAGGATGAACAAGAGGCGTTACTCTTGAATTACCAGGGAT
CGCGGTTATCCGTTCGTTCCATACGCCGGATTCTCGATGGATTGGCGCTGGAGGCTGGGTTATCACAACACCTTCATCCC
CATATGCTTCGTCACTCCTTTGCCACCCATTTACTTGATGGCGGAGCTGATCTTCGCAGCGTCCAGGAGCTATTGGGGCA
TGCCAAGCTCTCCTCTACCCAGATCTATACTCATTTAACGAAGGAACGATTACGGGAAATCTATGAGCAAAGTCATCCCC
GGGCAAAGAAAATGTAA

Protein sequence :
MQADHALSLFDGHLKTQNRSEHTLIAYHNDLIQFFDFAARELGEEPEKITVDQVDIYIVRSFLGEMTDRGLERKSMARKL
SALRAFFKFLCREGILQKNPIQRIATPKLGRKLPHFLSIEELDKLIHTPDCTTLLGARDQVILELLYGSGLRVSELADLN
RQDIDEGTSLLRVRGKGNKERIVPLTHYALEAARKYLNMREDEQEALLLNYQGSRLSVRSIRRILDGLALEAGLSQHLHP
HMLRHSFATHLLDGGADLRSVQELLGHAKLSSTQIYTHLTKERLREIYEQSHPRAKKM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-41 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-41 43