Gene Information

Name : Desde_3113 (Desde_3113)
Accession : YP_006431198.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Unknown
Product : ATP dependent peptidase subunit CodW
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3112575 - 3113105 bp
Length : 531 bp
Strand : -
Note : PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit

DNA sequence :
ATGTTCCATGCAACGACCATCGTTGCCGTAAAAAAGGATAACCAGGTAGCAATGGCTGGTGATGGCCAGGTTACTATGGG
CCAGGCAACTGTTATGAAGCATAAAGCAAGAAAAGTGCGCCGACTGTTCCACGGCAAAGTTCTTGCCGGGTTCGCTGGTT
CCGTTGCCGATGCTTTTACACTCTTCGAGAAATTTGAAAATAAGCTTGAGGAATACCAAGGAAATCTCCAACGAGCTGCT
GTAGAGCTTGCCAAAGACTGGCGGATGGATAAGGCACTTCGCAATCTTGAAGCTCTGCTCATTGTAGCAGATAAACAAAG
CATGCTCTTAATTTCAGGCTCTGGTGAGGTCATCGAACCTGACGATGGAATAGCGGCGATTGGCTCCGGTGGTAACTATG
CTTTAGCAGCAGCCCGGGCATTGGTTAAAAATACAGATCTCCAACCTGCACAGCTTGTTCAAGAGGCTATGGAGGTTGCT
TCGTCTATTTGCGTATATACCAATGACCAAATTATTGTTGAAGAACTGTAA

Protein sequence :
MFHATTIVAVKKDNQVAMAGDGQVTMGQATVMKHKARKVRRLFHGKVLAGFAGSVADAFTLFEKFENKLEEYQGNLQRAA
VELAKDWRMDKALRNLEALLIVADKQSMLLISGSGEVIEPDDGIAAIGSGGNYALAAARALVKNTDLQPAQLVQEAMEVA
SSICVYTNDQIIVEEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 4e-38 50