Gene Information

Name : Desde_2883 (Desde_2883)
Accession : YP_006430979.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Unknown
Product : thymidine phosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : 2.4.2.4
Position : 2894242 - 2895534 bp
Length : 1293 bp
Strand : -
Note : PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase

DNA sequence :
ATGCGGGTAGTTGATATAATTAACAAAAAAAAGATAGGTCACGCCTTGACCCAAGAAGAAATAGAGCATTTCGTACAAGG
TTATGTAAAGGGTGAGATTCCCGACTATCAGATATCTGCTCTTTATATGGCCATTTACTTTCAAGGGATGAATGATGAGG
AAATCGCCAACTTGACCATGGCCTATGTGAACTCTGGCGAGACCATCGACTTATCCGGTATCGATGGAGTAAAAGTAGAT
AAGCATTCAACTGGGGGAGTGGGGGATAAGATAAGCCTAATCGTCATTCCCCTGGTTGCTTCATTAGGAATCCCTGTGGC
TAAAATGAGTGGAAGAGGGTTAGGTCATACCGGCGGTACCATTGATAAACTTGAAGCGATACAAGGATTCAGAACTGCCT
TAAGTACGGAGGAGTTTATCGCCAATGTGAATAACCACGGAATGGCGGTAGTGGGTCAAACAGCAAACTTAACCCCTGCC
GACAAACTTACCTATGCCTTAAGAGATGTTACAGGAACCGTGGATAGTATTCCGCTCATAGCAAGTTCAATCATGAGTAA
AAAGATTGCCTCTGGGGCAGATGCCATAGTTCTTGATGTTAAAGTAGGTTCGGGGGCTTTCATGAAATCCCTCGAGGAAG
CCAAAAAACTTGCAGAGTGCATGGTGCAAATAGGGAAGTCATTAAAGAGAAGGACCATCGCTATAATTACAGATATGAAT
CAGCCTCTTGGACATGAAGTAGGGAATGCCAATGAGATAAGAGAGGTTATCGATGTTCTAGGCGGAAAAGGAGCTGAGGA
CGAAACAACTGTTGCTTTGACGATTGCCGCTTATATGGCTATTGCCAGTGGAAAATATCATGATTTCCAGTCAACTTATG
GGGAGCTTCTGCAAGTTATTGCCTCAGGTAAGGCCATAGAGAAATTAAAGGAGCTTATCTCAATTCAAGGAGGAAATCCA
CAAATTGTCCATGAGCCGTGGCAACTACCGCAAGCGAAACATCATATAGAAATCCTCTCAACCCATGCGGGATATGTAAG
CTATATTGACGCTGAATACATTGGGCTTGTTGCTATGCAGTTAGGGGCAGGAAGAAAGAAGAAGGACGACCCCATTGATT
ATGCAGCAGGGGTAACTCTTTTGAAGAAGGTCGGAGATTATGTTGACCTTAATGAACCACTATGTATTCTTCATACCAAC
CTTGATCATGTGGAAACGAATGTTTTAAAGGCCTATGCATTTCAAGATAGCAAGCCTGCCCCGATGGAATACATTCATGA
GATCATAAAATAG

Protein sequence :
MRVVDIINKKKIGHALTQEEIEHFVQGYVKGEIPDYQISALYMAIYFQGMNDEEIANLTMAYVNSGETIDLSGIDGVKVD
KHSTGGVGDKISLIVIPLVASLGIPVAKMSGRGLGHTGGTIDKLEAIQGFRTALSTEEFIANVNNHGMAVVGQTANLTPA
DKLTYALRDVTGTVDSIPLIASSIMSKKIASGADAIVLDVKVGSGAFMKSLEEAKKLAECMVQIGKSLKRRTIAIITDMN
QPLGHEVGNANEIREVIDVLGGKGAEDETTVALTIAAYMAIASGKYHDFQSTYGELLQVIASGKAIEKLKELISIQGGNP
QIVHEPWQLPQAKHHIEILSTHAGYVSYIDAEYIGLVAMQLGAGRKKKDDPIDYAAGVTLLKKVGDYVDLNEPLCILHTN
LDHVETNVLKAYAFQDSKPAPMEYIHEIIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 2e-68 45