Gene Information

Name : Desde_2449 (Desde_2449)
Accession : YP_006430576.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Unknown
Product : transposase, IS30 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2465341 - 2466288 bp
Length : 948 bp
Strand : -
Note : PFAM: Integrase core domain

DNA sequence :
ATGAGCTATACACATCTTAGCACGTTTGACCGCGGGCGGCTAGAATCCCTACATAAGTTGGGATGGTCTACCCGTGAGAT
TGCGCAGGAACTTAAACGACACCACTCTACAATTGCTAGAGAGTTACAACGAAATCAAATAAATAATAGCTATACCTCAC
AACAGGCTCAGAAAACTTATGAGCAACGTCGCCGAAAGTCAAAACCTACTGGGAAATGGTCTACTTCGTTAGCTACAATC
ATAAACAGAAAGCTTAAACTAACATGGTCACCAGAACAAATTGTAGGACGGTTATTTCAGAGACAGTTAAGTTACAAAAC
AATTTATAGATGGATCTATCAAGGGCTATTGATTAAAGGAAACTTAGCTCTCTTACGACACAAAGGGAAACGACAGAAAC
CCAAAGAAACCAGAGGAAGATTTAATGTTGGGACCTCGATCCATAAACGTCCAAAGGATGTCAAAAAGAGACTATCTTTT
GGTCATTGGGAACTGGATACTGTAGTATCAAGCCGTGGTAAAAGTAAAGGTTGCCTCGCAACATTTGCAGAAAGAAAGAC
CCGCATCTATTTAGCCCTACCCATGGAAGATCGAACAGCTGGATCGATGGAGATGGCAATACGAACACTTCACGGCTTCT
ACCCTATAGGGACCTTTAAAACAGCCACCGTCGATCGTGGAAAAGAATTTGCTTGTTATCCATCCATAGAAAAAGACCTT
AACTTACCTATATACTTTGCCGACCCTTATTCATCCTGGCAAAGAGGAACAAATGAAAACTCTAATGGGTTGTTAAGAGA
GTTCTTCCCGAAAGCCACCGATTTGGCAAAGGTATCTGAGAATCAAGTGGCTACAGCCTTGGCACTCATTAATAGTCGTC
CAAGAAAATGTCTTAACTGGAAAACACCACACGAAGCTTTTATAGAAGAACTGTCGCACTTAACTTGA

Protein sequence :
MSYTHLSTFDRGRLESLHKLGWSTREIAQELKRHHSTIARELQRNQINNSYTSQQAQKTYEQRRRKSKPTGKWSTSLATI
INRKLKLTWSPEQIVGRLFQRQLSYKTIYRWIYQGLLIKGNLALLRHKGKRQKPKETRGRFNVGTSIHKRPKDVKKRLSF
GHWELDTVVSSRGKSKGCLATFAERKTRIYLALPMEDRTAGSMEMAIRTLHGFYPIGTFKTATVDRGKEFACYPSIEKDL
NLPIYFADPYSSWQRGTNENSNGLLREFFPKATDLAKVSENQVATALALINSRPRKCLNWKTPHEAFIEELSHLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0085 YP_039551.1 transposase Not tested Type-II SCCmec Protein 1e-87 59
unnamed BAC67550.1 putative transposase Not tested Type-IVc SCCmec Protein 8e-88 59