Gene Information

Name : Desde_2213 (Desde_2213)
Accession : YP_006430352.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2222640 - 2224373 bp
Length : 1734 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGCGCCGAACAAAAATAGTATGTACCATCGGACCGTCCAGCGAATCCAATGAGAAGGTTCATCAATTACTTAAGGCCGG
CATGAATGTCGCTCGTTTAAATTTCTCCCATGGAACCCATGCTGAGCATGGGAAACGAATACGTACGTTAAGAGAAGAGG
CACAAAAACTTGGCGTTCATCTGGGAATTCTTCTGGATACAAAAGGCCCCGAAATCAGAACGGGAACGGTTCCGGATGAA
GGAGTTCAATTAAATAGCGGAGAAACCTTTATTCTTGATACAGATCTATCCACTCTTGGCTCGGCAGAGCGAGTGGGTAT
AACCTACCTCCAGCTTTGGCAGGAGGTTCGCCAAGGGACTCATATCCTCCTTGATGATGGTCTCATAGACCTTGAAGTGA
TATCCAGTGAAGAAGAAAAGATCATCACTAAAATCCAAAATGGGGGAGTTCTTAAATCGAAAAAAGGGGTCAATGTACCC
GGTGTTCCGATCCAGCTGCCGGCGATTACGGAAAAAGATCGTGATGATATCATTTTTGGACTAAGGGAAGGAATCGACTT
TATTGCCGCTTCTTTTTCCCGGAAGGCTTCCGATATTTTGGCCGTACGACGCCTGGTTGAGGAAGAAGGAGCTAATGTCA
AAATTATCGCCAAGATTGAAAGCCGCGAAGGTATTGATAATTTAGATGAGATCTTAGAAGTTGCTGATGGACTGATGGTG
GCCCGCGGGGATCTGGGAGTGGAAATACCTGTAGAAGAGGTCCCCATTCACCAAAAGGACATGATTGAAAAATGCCATCG
TTTAGGTAAACCCGTCATCGTCGCTACGCAAATGCTGGATTCCATGATCCGTAACCCGCGGCCTACACGGGCAGAAGCCA
GCGATGTGGCCAATGCTATCTTAGATGGCACTGATGCCATTATGCTCTCAGGGGAGACCGCAGCCGGACAGTATCCGGTG
GAAGCGGTAGAGATGATGAATAAGATCGCTCTGCAGATCGAGAAGCATTATGATTCAAGGCCCATTTATGACCCCCATAT
CAATATCGCTGAAGCCATCAGTCATGCCAGCTACACCATAGCCAGAGATCTGGAAGCTGCCGCTATCTTAACACCGACTC
ATTCCGGGTTGACGGCTCGCATGATATCGAAGTACCGTCCCACATCCTTAATTATTGCAGCCACACCCTTTGTTCATGTA
GCACGTCAGCTCTCTTTGACCTGGGGAATTTATCCTTTGCTTATTCCAGAGAGTTTAGGTACGGACCAGCTTTTATCTGT
TTCTGTCAATGAAGCCATTTCTCATCACCTGATTAAAACCGGTGATGTGGTTGTCATTACTGCGGGAGTTCCCGTTGGTA
AAGTAGGGACCACCAATATCATTAAAGTCCAAGTCATAGGGGATGTACTTGCTAAAGGAACGGGGATTGGACGCAAAGCT
TATTCCGGAACGGCACGAATCATTACCCCAGCGACTAAAGACTTCTTCCAGAAGGGAGATATTCTGGTAGCACCCTATAC
CGATAAAGAGCTGATCCCATTAATCTCTAAAGCCGGAGCAATTCTTGTCGAAGAAGGGGGACTCACCTCCCATGGGGCTA
TAGCCGCCTTAAACTATGGAATTCCGGCCATTGTCGGTGCCGCTGATGTGATTATGAAGATTAAGGATGGGCAGGTCTTG
ACCGTGGATGCTTTGGCGGGAGTAGTCTACGATGGTACAGTCAGCATTCTCTAG

Protein sequence :
MRRTKIVCTIGPSSESNEKVHQLLKAGMNVARLNFSHGTHAEHGKRIRTLREEAQKLGVHLGILLDTKGPEIRTGTVPDE
GVQLNSGETFILDTDLSTLGSAERVGITYLQLWQEVRQGTHILLDDGLIDLEVISSEEEKIITKIQNGGVLKSKKGVNVP
GVPIQLPAITEKDRDDIIFGLREGIDFIAASFSRKASDILAVRRLVEEEGANVKIIAKIESREGIDNLDEILEVADGLMV
ARGDLGVEIPVEEVPIHQKDMIEKCHRLGKPVIVATQMLDSMIRNPRPTRAEASDVANAILDGTDAIMLSGETAAGQYPV
EAVEMMNKIALQIEKHYDSRPIYDPHINIAEAISHASYTIARDLEAAAILTPTHSGLTARMISKYRPTSLIIAATPFVHV
ARQLSLTWGIYPLLIPESLGTDQLLSVSVNEAISHHLIKTGDVVVITAGVPVGKVGTTNIIKVQVIGDVLAKGTGIGRKA
YSGTARIITPATKDFFQKGDILVAPYTDKELIPLISKAGAILVEEGGLTSHGAIAALNYGIPAIVGAADVIMKIKDGQVL
TVDALAGVVYDGTVSIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 9e-100 52
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 9e-100 52
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-100 52
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-99 52
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 1e-60 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_2213 YP_006430352.1 pyruvate kinase VFG0479 Protein 4e-100 52