Gene Information

Name : Desde_1890 (Desde_1890)
Accession : YP_006430075.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Virulence
Product : Fe-S-cluster-containing hydrogenase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1916465 - 1917034 bp
Length : 570 bp
Strand : -
Note : PFAM: 4Fe-4S binding domain

DNA sequence : 
ATGGCAAAGAGAATGGGATTTGTGATTAATGTGAAACGGTGCGTAGGATGCAAGACCTGTACCGTATCCTGCAAAATGGA
AAATACAGTAGCTGCCGGGCTGGCACGGATTCGCGTGCTGGATGATCATCAGGCGGAAGTCTTTGATAAACCTACCGGGA
CCTATCCGAACCCGGTAAGAAATTTCGTTCCGGTACCTTGTCAGCACTGTGACAACGCTCCCTGTGTTCCTGTCTGCCCC
ACCGGTGCTTCAAAGAAAAGAGAAGACGGCATTGTCTATGTGGTGAAGGAAGACTGCATCGGCTGTGGCGTATGCGTGGC
TGCTTGTCCTTATGGCTCCAGACAAATGGATAAGGAGAGCAAAAAGGTTGATAAATGCACCCTATGCATGCATCGGCTGG
AGGAGGGCAAAGACCCTATGTGTGTCTACTGTTGTCCGGGCCGGGCAATTACCTATGGCGATCTCAATGATGCCAATTCA
GAAGCCGCCAAACTAGTCAGCAGTCAAACGGCAAAGACCATTAAATCAGAATTGGGTACCGGTCCCGCAGCCTACTATAT
CTTACCTTAA

Protein sequence : 
MAKRMGFVINVKRCVGCKTCTVSCKMENTVAAGLARIRVLDDHQAEVFDKPTGTYPNPVRNFVPVPCQHCDNAPCVPVCP
TGASKKREDGIVYVVKEDCIGCGVCVAACPYGSRQMDKESKKVDKCTLCMHRLEEGKDPMCVYCCPGRAITYGDLNDANS
EAAKLVSSQTAKTIKSELGTGPAAYYILP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 5e-32 41
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 5e-32 41
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 4e-32 41
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 3e-32 41
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_1890 YP_006430075.1 Fe-S-cluster-containing hydrogenase subunit VFG0486 Protein 1e-32 41