Gene Information

Name : Desde_1774 (Desde_1774)
Accession : YP_006429963.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Unknown
Product : PLP-dependent enzyme, glutamate decarboxylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1786284 - 1787714 bp
Length : 1431 bp
Strand : -
Note : PFAM: Pyridoxal-dependent decarboxylase conserved domain

DNA sequence :
ATGCATGAAAAAATTACAACAAGCAAACAAATAGAGAATGCCGCTGAAGAATTTATTAGAAATTTCTTTTCTTATTATCG
CAAATTACCCAATGACAAAATAATTAACGAAATAGATAATGATAAAATAGAAAACTTGAGGAAAATTGGTATTCCTATTC
AAGGGCGCGCTATAGACACTGTGGTCAATGAAATGGTAGAAGATATTTACCAATATGGAAATAATGTCAATCATCCTCGG
TATCTAGGTTTTATTCCCGGACCTGCTTCCATGCTTTCTTGGCTCGGTGATGTTATGACTTCAGCGTTCAATCGTCATGC
CGGAAGTTGGGTATCCTGCCCTGCCGCAAGCTGTATTGAACAGGAATTAATAGGATGGCTATGTGATCAGGCTGGTTTCA
CTGAAAAGTCAGGCGGACTGTTTGTATCCGGAGGTTCTATGGCCAACCTGACTGCAATGACTGTTGCCAGAGATAAAATT
CTCTCAGAGGAAACTCAGCATTTGGGAGTTGCCTATGTTTCAGAGCAAACCCACAGTTCTGTGGCAAAAGGACTACGTAT
TATTGGAATCCCTGATAGCAGAATACGGAGAATACCTGTAGATTCATATTTTAAAATGGATACGGACCATTTAACATGTT
CCATTCAGAAAGATATAGATGAGGGGCTTGCTCCTTTTATTGTTATCGCAAGTGCAGGGACAACAAATACTGGCAGTATT
GATCCATTCGAAAAAATCTCTTCTATATGCCAGCGTTACGGTATGTGGATGCATGTGGATGGAGCATTTGGCGCTTCCGT
CCTGTTGACAAAGACTCATAAGAACCTGCTTAAAGGAATAGAACTTTCTGATAGTATTAGTTGGGATGCACACAAGTGGC
TGTTCCAGACCTATGCATGCGGTATGATTTTAGTGAAAAACAGAGAAAACCTGATGAATAGTTTTCATGTGCAGCCTGAA
TATTTAAAAGATTTAGGGGCAGTACAGGATTCCTTTAACCCATGGGAAATGGGTATAGAGTTGACAAGACCAGCTCGTGG
ACTCAAGTTATGGTTTACTTTGCAGGTTATGGGCAGTGATGCGATTGGGGCTGCCATCGAGCATGGATTTCAACTTGCGG
AATGGGCAGAGGATGAATTGAAAAAAAATAAGGAGATAGAAATAGTTTCCCCGGCACAAATGGCTATTGTCAATTTCCGG
TACAGTCCTCGTAATATGACTGAACATCAAAAGGACGAGCTGAATCAGCAGATTTCGAAAAAAATGCTTGATAGTGGTTA
TGCTGGTATCTTTACTACCGAGATAAACGGGAAAAAAGTTTTGCGCATTTGTGCAATTCATCCGGATACAACAGAGGTCG
ATATACGCAACACTGTTAGGCTTTTGAATCGATATTTTGAAGAACTTGTCAGTTTCCAAAGGACTGAATGA

Protein sequence :
MHEKITTSKQIENAAEEFIRNFFSYYRKLPNDKIINEIDNDKIENLRKIGIPIQGRAIDTVVNEMVEDIYQYGNNVNHPR
YLGFIPGPASMLSWLGDVMTSAFNRHAGSWVSCPAASCIEQELIGWLCDQAGFTEKSGGLFVSGGSMANLTAMTVARDKI
LSEETQHLGVAYVSEQTHSSVAKGLRIIGIPDSRIRRIPVDSYFKMDTDHLTCSIQKDIDEGLAPFIVIASAGTTNTGSI
DPFEKISSICQRYGMWMHVDGAFGASVLLTKTHKNLLKGIELSDSISWDAHKWLFQTYACGMILVKNRENLMNSFHVQPE
YLKDLGAVQDSFNPWEMGIELTRPARGLKLWFTLQVMGSDAIGAAIEHGFQLAEWAEDELKKNKEIEIVSPAQMAIVNFR
YSPRNMTEHQKDELNQQISKKMLDSGYAGIFTTEINGKKVLRICAIHPDTTEVDIRNTVRLLNRYFEELVSFQRTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0069 YP_251984.1 hypothetical protein Not tested SCCmec Protein 5e-94 47
unnamed BAH57704.1 hypothetical protein Not tested Type-VII SCCmec Protein 2e-93 47