Gene Information

Name : Desde_1652 (Desde_1652)
Accession : YP_006429848.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1653844 - 1654527 bp
Length : 684 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGGACATTCTGAAGGTTGAAAAGCTTTGTAAAACCTATGGAACACGAGAAGCCCAGGTCCAGGCCTTAAAAGAGGTTTC
TTTTACTATGGAAAAAGGGGAATTTGCGGCGGTGGTCGGTGAATCCGGCTCCGGCAAAAGCACTTTGCTGAACTGCATCG
GCGGTTTGGATAACCCCACCTCCGGCGGAGTCTTTCTGGAGGGCAGAAATCTCTTCAGTATGAAGGAAAGAGAGCGGACC
GTTTTCCGACGTAGAAATATTGGCTTTGTCTTTCAGTCCTTTCAATTGATCCCGGAATTAACGGTGGAGCAGAATATTAT
TTTTCCCCTTCTGCTGGACTATCAAAAACCTGATCCCGGTTCAGTCAAGGAGATTTTAGAGGTATTGGGGCTGACGGAAC
GCAGGAATCATCTTCCCAGCCAGCTTTCCGGCGGTCAGCAGCAACGGACGGCTATTGGCCGTGCTTTGATTACCAAGCCC
ATGCTGATCCTGGCCGACGAGCCCACGGGGAACCTGGACAGCAAGAACAGCCGGGATGTCATGGATTTGCTTCTGAAAGC
CTCCCGGCACTATCAGCAGACTATTTTGATGATTACTCATAATATTAATCTGACTTCCTCGGTAGATCGCGTCCTGAAGG
TAACGGACGGTGTGCTTGCCGATCTGGGAGGGATGAGGGGATGA

Protein sequence : 
MDILKVEKLCKTYGTREAQVQALKEVSFTMEKGEFAAVVGESGSGKSTLLNCIGGLDNPTSGGVFLEGRNLFSMKERERT
VFRRRNIGFVFQSFQLIPELTVEQNIIFPLLLDYQKPDPGSVKEILEVLGLTERRNHLPSQLSGGQQQRTAIGRALITKP
MLILADEPTGNLDSKNSRDVMDLLLKASRHYQQTILMITHNINLTSSVDRVLKVTDGVLADLGGMRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-39 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-39 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-39 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-39 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_1652 YP_006429848.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-72 66
Desde_1652 YP_006429848.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 5e-52 54
Desde_1652 YP_006429848.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-34 44
Desde_1652 YP_006429848.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 7e-40 41