Gene Information

Name : Desde_1577 (Desde_1577)
Accession : YP_006429775.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Resistance
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1576619 - 1577272 bp
Length : 654 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGCATCCATTTTAATCGTCGAGGATGAGGAGGCAATCAATGAGCTGGTTAAAAGAAATCTGCAGCTTGTAGGTCATCA
TTGTGCCTCTGTTTTCGATGGGATAACCGCTGTATCGGAAATACAGTGCCAATCCTACGATTTGATAATTTTAGATATTA
TGCTGCCGGGGCTGGACGGCTTTGAGGTAATAAAGCATGCGAAAAACACACCCACTATCTTTCTGACAGCCAAAGATAGC
CTGCCGGACCGGCTCAAGGGCTTGTCAATGGGTGCGGATGATTATCTGACAAAACCCTTTGAAATGCTGGAACTGCTGGC
TCGCGTTGAAGCGGTTCTGCGGCGTACTCAGAAAGCTGCAAGCTGTTTTGAAGCAGGTAGAGTAAGGATCGATTTTGACA
GCCGTCAGGTATTTCATGACGGACAGTTGGTGGAGTGCACCCCCAAGGAATATGAGCTCCTTGAAGTGCTTGTCAACAAC
CGGAATATCGCACTCTCCAGGGAAAGGCTGCTGGAACTGGTTTGGGGCTATGATTTCGAGGGAGATACCCGGACCGTGGA
TGTACACATCCAAAAGCTGCGTAAAAAGCTGGGCTGGGAAGAGCGGATAAAAACCGTATACAAGCTTGGGTACCGTCTGG
AGGTTAGCCGGTGA

Protein sequence :
MASILIVEDEEAINELVKRNLQLVGHHCASVFDGITAVSEIQCQSYDLIILDIMLPGLDGFEVIKHAKNTPTIFLTAKDS
LPDRLKGLSMGADDYLTKPFEMLELLARVEAVLRRTQKAASCFEAGRVRIDFDSRQVFHDGQLVECTPKEYELLEVLVNN
RNIALSRERLLELVWGYDFEGDTRTVDVHIQKLRKKLGWEERIKTVYKLGYRLEVSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-29 42
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 8e-33 45
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 1e-35 43
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 3e-36 43
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 3e-36 43
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 9e-36 43
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 3e-36 43
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 3e-36 43
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 3e-36 43
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 3e-36 43
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 3e-36 43
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 3e-36 43
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 2e-31 43
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 3e-27 42
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 2e-30 42
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF310956.2.orf0.gene Protein 5e-30 42
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain U35369.1.gene1.p01 Protein 8e-30 41
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene2255. Protein 8e-30 41
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 2e-33 41
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 2e-33 41
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_1577 YP_006429775.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 4e-29 43