Gene Information

Name : Desde_1303 (Desde_1303)
Accession : YP_006429523.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase/cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1311621 - 1312760 bp
Length : 1140 bp
Strand : -
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme

DNA sequence :
ATGAATATTTTAACCGAACTGGCTCAGATCGGCAACCGCCGAGATCCCAATGGAGCGATTAGCTTTCCAATTTACCATTC
ATCCACCTTTGCTCACCCTGGCTTCGGTGAAAGCACAGGCTTTGATTACTCACGAACCGGCAACCCTACCCGCCAAATTC
TGGAAGACGCTATGGCAAGCATAGAAGAAGGTACCAAAGGGTTTGCTTTTTCTTCAGGCATGGGCGCCATCACCACTATT
CTCTCCTTATTTTCTCAAGGAGATCATCTCCTTGTTACAGAAGATCTTTATGGGGGAACCTATCGCATCCTTAAGGAAGT
CTTCAACCGCTTTGGTCTTCAAGTGACCTTTGTGGATTCCAGCAATCTCAGGGCCATAGAAAAAGAGATCCGCCCCGACA
CAAAAGCCATCTTCACCGAAACACCGACCAACCCTCTAATGAAGGTTGCCGACCTTAAGGGGATCGCTTCCTTGTGCCAG
ATGCACGGTCTCTTAAATATAGTGGACAATACTTTTCTTACACCCTATTTGCAAAAACCACTGAACCTGGGTGCAGACAT
TGTTATTCATAGTGGCACCAAATATCTCGGTGGTCATAATGATGTCGTGGCGGGCCTCGTAGTGGTTCAAGGAGAAGAGC
TTGCAGCTCGCTTTGGACGTTTGCAGAACTCTCTCGGCGCTACATTAGGCCCCCAAGATTCCTGGCTAATTATCCGGGGT
TTGAAAACCTTGGCCCTGCGCATGAGAGCACAAGAAGAAAATGCCCTCCAGATTGCACAATGGCTGGAGATGCATCCCCT
TGTCACCGAGGTCTATTATCCCGGACTTGAGCATCATCCCGGATATGCAACTCAGCTTGAACAAGCCCGAGGCTTTGGTG
CTATGCTATCTTTCCGAGTAAAAAGTCCCAGCTTAATCCCCGAAATATTAAAATCTCTCAAGATTATTTCCTATGCAGAG
AGCCTTGGTGGTGTAGAATCTCTAATCACTTATCCCGCTACCCAAACCCATGCTGATATTCCTCACGAAGTAAGGGCAAG
GCTTGGGGTGGACGATTGTCTTCTCCGGTTATCCCTAGGTATCGAAGCCGCCGAGGATCTCATTGGAGATTTAGAACAAG
CTTTAAAGCAGATGCTTTAG

Protein sequence :
MNILTELAQIGNRRDPNGAISFPIYHSSTFAHPGFGESTGFDYSRTGNPTRQILEDAMASIEEGTKGFAFSSGMGAITTI
LSLFSQGDHLLVTEDLYGGTYRILKEVFNRFGLQVTFVDSSNLRAIEKEIRPDTKAIFTETPTNPLMKVADLKGIASLCQ
MHGLLNIVDNTFLTPYLQKPLNLGADIVIHSGTKYLGGHNDVVAGLVVVQGEELAARFGRLQNSLGATLGPQDSWLIIRG
LKTLALRMRAQEENALQIAQWLEMHPLVTEVYYPGLEHHPGYATQLEQARGFGAMLSFRVKSPSLIPEILKSLKIISYAE
SLGGVESLITYPATQTHADIPHEVRARLGVDDCLLRLSLGIEAAEDLIGDLEQALKQML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-89 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-90 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-67 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_1303 YP_006429523.1 cystathionine beta-lyase/cystathionine gamma-synthase BAC0207 Protein 1e-62 43