Gene Information

Name : Desde_1294 (Desde_1294)
Accession : YP_006429515.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1304688 - 1305386 bp
Length : 699 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGAGTCTTATCAAGGTCAATCACGTATCAAAAATCTATCAAGGCGGGGAAGGATCAGTCCATGCCCTAAAAAATATTAA
TCTCCAGATTTCTCAAGGTCAGTTTCTAGCTTTGTTGGGGCCTTCCGGGTCGGGAAAGAGTACCCTACTCAGTATCCTTG
GTGCGTTGAACCCACCCACAGAGGGTAAGGTCTTAATCGATGATATTGACATCTATGAGTTGAATGAAGAGCGAAGAGCC
GATTTCCGCCATGAGTATATTGGGTTTGTCTTTCAGCAATATCAGTTGATCCCTTATCTTACTGCCTTAGAAAATGTCAT
GCTTCCCTTAGCGATTACCAAGTACTCGGATCAAGCCCAAAGGGAGATGGCTCAAAAAGTTCTGGAAAAGGTAGGGTTAG
GCAAAAAGTCCATGCGGCTGCCTAACCAGCTTTCCGGTGGAGAGCAAAATCGAGTGGCCATCGCCCGAGCCATTGTCAAT
GATCCGGTGATTCTTTTCGCCGATGAACCGACAGGAAGTCTAGATACCAAGACAGCTAAGGAAATCCTGGAACTCTTCCA
GTCCTTAAATAAAGAAGGGCAGACCATTATCATGGTGACCCATAATCTAGAGAATCTTGCCTATGTCTCCCATGGGGTAC
AGATTCGCGATGGAATCATTGAGAAGGATCCGCAGCCTGTGGTTGGTGGTACAATATGA

Protein sequence : 
MSLIKVNHVSKIYQGGEGSVHALKNINLQISQGQFLALLGPSGSGKSTLLSILGALNPPTEGKVLIDDIDIYELNEERRA
DFRHEYIGFVFQQYQLIPYLTALENVMLPLAITKYSDQAQREMAQKVLEKVGLGKKSMRLPNQLSGGEQNRVAIARAIVN
DPVILFADEPTGSLDTKTAKEILELFQSLNKEGQTIIMVTHNLENLAYVSHGVQIRDGIIEKDPQPVVGGTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-36 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_1294 YP_006429515.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-48 49
Desde_1294 YP_006429515.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 5e-41 42
Desde_1294 YP_006429515.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 3e-37 42