Gene Information

Name : Desde_1291 (Desde_1291)
Accession : YP_006429512.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1302080 - 1302772 bp
Length : 693 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGCGAATTCTCTTAGTGGATGATGAAAAAAATATCAGCAATGTCCTTAAAGCCTATCTCCAGCAGGAAGGGTTTCATGT
GACCACAGCGGTCAATGGCCTCGTAGCCTTGACCTTATTTAAAGAAAATTCCTACGATCTCGTCCTTCTAGACCTTATGC
TGCCCGGCTTATCCGGTGAAGAAATCTGTAGGGAGATTCGTAAAATCTCGGCCACTCCTGTTATTATGCTCACAGCCAAG
GTCGAACTGGAAGATCGGCTTCAAGGCCTTAACCTGGGCGCCGATGACTATATTAGTAAACCATTTAGCCCGCGGGAAGT
TGTGGCTCGGGTCAAAGCAGTGCTTAGGCGAACCCATATAGAAACCTCTCCCCTTGCCGATAGTATCACCTACGATAATG
GCTTGACCATTGATAACTCACGGCACGAAGTCCGTTTACTGGAAGAGGTCGTCTCCCTTACCCCCACTGAGTTCAAAGTT
CTAGGTGCCTTAGCCAAATATCCGGGAAGAGTGTATTCCCGAGGGCAGCTGGTACAAATCGTCCAAGGGCATGATTTTGG
CGGGGATGAACGGGTGATTGATGCTCATATCAAAAAACTCCGCCAAAAAGTCGAGAAAGTACCCAGTGATCCCAAAATCA
TCCTGACGGTCTATGGAGTCGGCTATAAATTCAACCCACATAAGGAGGAGTAA

Protein sequence :
MRILLVDDEKNISNVLKAYLQQEGFHVTTAVNGLVALTLFKENSYDLVLLDLMLPGLSGEEICREIRKISATPVIMLTAK
VELEDRLQGLNLGADDYISKPFSPREVVARVKAVLRRTHIETSPLADSITYDNGLTIDNSRHEVRLLEEVVSLTPTEFKV
LGALAKYPGRVYSRGQLVQIVQGHDFGGDERVIDAHIKKLRQKVEKVPSDPKIILTVYGVGYKFNPHKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-35 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 2e-30 46
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 3e-34 45
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 2e-33 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 1e-33 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 1e-33 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 1e-33 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 1e-33 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 2e-33 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 1e-33 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 1e-33 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 1e-33 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 1e-33 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain DQ212986.1.gene4.p01 Protein 6e-32 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF130997.1.orf0.gene Protein 2e-29 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain EU250284.1.orf4.gene Protein 7e-31 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 7e-31 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 5e-32 44
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF162694.1.orf4.gene Protein 4e-30 43
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene3215. Protein 1e-28 43
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 1e-37 43
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 7e-38 43
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene2531. Protein 3e-38 43
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 4e-37 43
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 7e-38 43
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 5e-38 43
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 4e-37 43
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011595.7057856.p0 Protein 2e-38 42
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 1e-37 42
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002989.p0 Protein 2e-38 42
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 2e-31 42
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene4257. Protein 5e-26 42
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene4273. Protein 1e-25 42
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0533 Protein 5e-26 42
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene1676. Protein 1e-33 42
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 2e-22 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 2e-22 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 2e-22 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 2e-22 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 2e-22 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 2e-22 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 2e-22 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 2e-22 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 2e-30 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 5e-29 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 5e-29 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.915041.p Protein 3e-25 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3834. Protein 3e-25 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 8e-34 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene5135. Protein 1e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 1e-35 41
Desde_1291 YP_006429512.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 1e-34 41