Gene Information

Name : Desde_1203 (Desde_1203)
Accession : YP_006429426.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1204283 - 1204984 bp
Length : 702 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGAAAAGCAGCTCAAAGTAATGTTAGTGGACGATGAGGATAGCATTCGCAAAGTCGTTGCCCATCTCGCTCAAAAGGA
AGGCTATGACTTTTGCTACGCTTCCGACGGGGAAAAGGCTTTACAAATGTTTGCCCAAGAGAATCCTGATCTGATCATTC
TGGATGTTATGCTACCGGAACTGGATGGGTTTGAAGTGTGCCGTAGAATTCGTCAAGAAAGTGCCGTCCCCATTATCCTC
CTTTCCGCCAAAGGGGATATTGTTGATAAAAGTGTAGGATTCAATATGGGGGCCGACGATTATATGACTAAGCCCTTTAG
CCCCATTGAGCTGGCCTTGCGTATGAAAGCCATGTTCCGCAGAGCCTTTAGACTTTCCACTGAGAGTTTGGCAGAGGATA
AAGATCGTTTGATCTTTAAAGATTTGGAAATTAATAATAAAACCTTTGAAGTTATCGTCCGTGGCAAAAAGGTGGACCTC
ACTTCAAAGGAGTTCGAACTTCTATCCTTTATGGCCAATCACCCTGGTCAGGTTTTTACCCGTCAGCAGCTTTTCGATAA
TCTGTGGGGAGAAAAATATTTAGGGGATTCTGGTACCATCACTGTGTTTATCCGCAAAGTCAGGGAGAAAATCGAGCTGG
ACCCCGGCCGTCCGGAATATATCCTAACCGTCTGGGGTGTGGGGTATAAATTTGCGGGTTAA

Protein sequence :
MEKQLKVMLVDDEDSIRKVVAHLAQKEGYDFCYASDGEKALQMFAQENPDLIILDVMLPELDGFEVCRRIRQESAVPIIL
LSAKGDIVDKSVGFNMGADDYMTKPFSPIELALRMKAMFRRAFRLSTESLAEDKDRLIFKDLEINNKTFEVIVRGKKVDL
TSKEFELLSFMANHPGQVFTRQQLFDNLWGEKYLGDSGTITVFIRKVREKIELDPGRPEYILTVWGVGYKFAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 4e-47 48
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 2e-45 45
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 4e-45 43
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 7e-44 43
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 8e-38 42
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 1e-40 42
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 1e-40 42
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 1e-40 42
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 1e-40 42
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 1e-40 42
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 2e-40 42
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 1e-40 42
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 1e-40 42
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 1e-40 42
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 1e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_1203 YP_006429426.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 2e-37 41