Gene Information

Name : Ornrh_0868 (Ornrh_0868)
Accession : YP_006426857.1
Strain : Ornithobacterium rhinotracheale DSM 15997
Genome accession: NC_018016
Putative virulence/resistance : Virulence
Product : glycosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 902727 - 903332 bp
Length : 606 bp
Strand : +
Note : PFAM: Bacterial sugar transferase

DNA sequence : 
ATGTACAAACACTTCCTTAAACGGTGCATAGATTTCATCGCAAGTCTTTTAGGGCTTATCATTCTAAGCCCAGTGTTGCT
AGTTTGCATAATATTTCTCTCTATAGCTAATCACGGGAGCCCCTTCTTCTTCCAAAGAAGACCTGGACTGAATGAAAAAA
TCTTTTCGATTGTAAAATTCAAAACGATGAATGACAAAAAAGATGCTCAAGGGAATCTCCTGCCTGATGCGGATCGTTTG
ACTTCTGTAGGGAAATTCGTGAGAAAAACTTCACTAGATGAAATCCCTCAACTTATCAATGTACTAAAAGGCGATATGAG
TTTAATCGGGCCTCGACCGCTCCTTCCAGAATACCTCCCGCTTTATAACGAAGAACAAAAAAAAAGACATTCTGTTCGCC
CTGGAATCACTGGGTGGGCACAAGTGAACGGGAGGAATGCAATCTCTTGGAATGAAAAATTCAAACTAGATGTTTGGTAT
GTTAAAAATTTAAGTCTAACTTTAGACACTAAAATATTATTTTTAACAATAAAAAAAGTGTTTAAATCAGAAGGGATTAA
CAAAGAGGGGCAAGCTACAACTTGCAAATTTGATGGCTCTAATTAA

Protein sequence : 
MYKHFLKRCIDFIASLLGLIILSPVLLVCIIFLSIANHGSPFFFQRRPGLNEKIFSIVKFKTMNDKKDAQGNLLPDADRL
TSVGKFVRKTSLDEIPQLINVLKGDMSLIGPRPLLPEYLPLYNEEQKKRHSVRPGITGWAQVNGRNAISWNEKFKLDVWY
VKNLSLTLDTKILFLTIKKVFKSEGINKEGQATTCKFDGSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 5e-20 44
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 5e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ornrh_0868 YP_006426857.1 glycosyl transferase VFG1369 Protein 4e-19 43
Ornrh_0868 YP_006426857.1 glycosyl transferase VFG1309 Protein 9e-23 41