Gene Information

Name : Ornrh_0844 (Ornrh_0844)
Accession : YP_006426834.1
Strain : Ornithobacterium rhinotracheale DSM 15997
Genome accession: NC_018016
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 873494 - 874186 bp
Length : 693 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGATTGTAGCCAAATTAGAAAAAGCGGGCAAAGAATACAAAAGTGGCGATACCACAATCGTTGCTTTGCAGCCTACGGA
TTTAGAAATCAACAAAGGCGAGCTCACACTTATTCTTGGACCCTCGGGCTCTGGAAAAACTACCTTGCTCTCTATGATTG
GCTGTGTGATTTATCCCAGCTATGGCAACATTTATCTGGAGGGGCAGCAAGTCAATAATTTAAAAGAAGACAAGCTCTCC
GAAATTCGATTGCACAAAATCGGCTTTGTGTTTCAAAGTTTCAACCTTATTCAGCCATTAAATGCTTTGGAAAATGTGAT
GCAACCACTGCTTTTGATGAAATTGGATAAAAAAACGGCTCGCGAAAAAGCTACCGAAGCACTCACCAAACTAGGTATAG
CCGAAAGAATGTACTCGCTCCCTAAGAATTTAAGCGGTGGGCAACAGCAGCGTGTTGCCATTGCGCGTGCATTGGTAACC
AATCCTTCTATTATATTGTGTGATGAACCCACCGCCTCGCTCGATGCCAAAAGTATAGGCGTGGTGATGGAAGAGCTTAA
AGAATTATCCAAAGAAGGCAAAGCGGTGATTATCGTAACACACGATCACCGACTCAAGAAATTTGCCGATCGCACCATTT
TTGTGTCTGATGGGCGTGCCTATGATTACGATCCCGAAGCCGAAGATTTTTAA

Protein sequence : 
MIVAKLEKAGKEYKSGDTTIVALQPTDLEINKGELTLILGPSGSGKTTLLSMIGCVIYPSYGNIYLEGQQVNNLKEDKLS
EIRLHKIGFVFQSFNLIQPLNALENVMQPLLLMKLDKKTAREKATEALTKLGIAERMYSLPKNLSGGQQQRVAIARALVT
NPSIILCDEPTASLDAKSIGVVMEELKELSKEGKAVIIVTHDHRLKKFADRTIFVSDGRAYDYDPEAEDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-35 45
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 9e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ornrh_0844 YP_006426834.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-44 50
Ornrh_0844 YP_006426834.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-35 44
Ornrh_0844 YP_006426834.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 9e-32 41
Ornrh_0844 YP_006426834.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 7e-33 41