Gene Information

Name : Ornrh_1611 (Ornrh_1611)
Accession : YP_006427563.1
Strain : Ornithobacterium rhinotracheale DSM 15997
Genome accession: NC_018016
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1631829 - 1632554 bp
Length : 726 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group

DNA sequence : 
ATGATACAAGTACAAAATTTAAGCAAAATCTACACAACTACAGAAGTGCAAACTGCGGCACTCAACGAAGTGAATTTAAA
TATAAAACAAGGCGAATTTGTTGCCATTATGGGACCTTCGGGTTGCGGAAAATCTACTTTATTAAATGTTTTGGGCTTGC
TCGACACGCCTACCAGTGGCAGCTATATTTTCAATGAACAAGAAACTACAAAAATGAACAAAAGCCAGAAAAATGATATC
CGAAAAAAGAATTTAGGCTTTATTTTCCAAAACTTTAATTTGATTGATGAGCTCAGCGTGAAAGAAAATATTGAACTCCC
GTTGATTTACAATCATGTACCGAGCCGAGAACGCAAAGCCAAAGTAACCGAAATTATGGAACAAATCGGGATTGCCCACC
GCGCCAATCACTTGCCACAGCAACTCTCGGGTGGGCAACAGCAGCGTGTTGCCGTAGCGCGTGCTTTGGTAAATAATCCA
AAATTGATTTTAGCCGATGAGCCTACGGGAAATCTCGACAGTACACACGGAGCCGATGTCATGGGGCTACTCGCCAAATT
ACACATAGAAGGGGCTACCATTGTGATGGTTACGCACTCTATGCACGATGCACGCTACGCCTCTCGTGTGGTGCAAATGA
AGGACGGAAAGATTTTTAACGATGAAAAAGTAAACGCTTATCTCGACTCGTTTGAGCAAGCCGCTTTAGAAAATCTTTCG
CTATAA

Protein sequence : 
MIQVQNLSKIYTTTEVQTAALNEVNLNIKQGEFVAIMGPSGCGKSTLLNVLGLLDTPTSGSYIFNEQETTKMNKSQKNDI
RKKNLGFIFQNFNLIDELSVKENIELPLIYNHVPSRERKAKVTEIMEQIGIAHRANHLPQQLSGGQQQRVAVARALVNNP
KLILADEPTGNLDSTHGADVMGLLAKLHIEGATIVMVTHSMHDARYASRVVQMKDGKIFNDEKVNAYLDSFEQAALENLS
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-35 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-35 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 8e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ornrh_1611 YP_006427563.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-52 48
Ornrh_1611 YP_006427563.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 3e-39 46
Ornrh_1611 YP_006427563.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-41 46
Ornrh_1611 YP_006427563.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 9e-43 44
Ornrh_1611 YP_006427563.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686946. Protein 9e-33 41