Gene Information

Name : CL1_0796 (CL1_0796)
Accession : YP_006424795.1
Strain : Thermococcus sp. CL1
Genome accession: NC_018015
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 730285 - 731292 bp
Length : 1008 bp
Strand : -
Note : COG0214

DNA sequence :
ATGGGAAGGCTCGATGTTATCGAGGCTAAGGGTACCGAGAGGCTCAAGAGGGGCTTTGCAAAGATGGTGAAGGGCGGCGT
CATAATGGACGTCACCAACGCCGAGCAGGCGAGGATTGCGGAGGAAGCGGGTGCCGTCTCGGTCATGGCCCTCCACCGCG
TTCCAGCCGATATCAGGAAGGCAGGTGGCGTTGCCAGAATGGCCCCGATAGAGAAGATTCAGGAGATAATGGACGCGGTT
ACGATTCCCGTGATGGCCAAGGTCAGGATAGGCCACGTGGCGGAGGCCAAAATACTCGAGGCCCTCGGCGTCGATATGAT
CGACGAGAGCGAGGTTCTCACGCCTTCCGACCCGTTCTTCCACATAGACAAGAGGGAATTCACCGTCCCCTTCGTCTGCG
GGGCCAGAAATCTCGGCGAGGCCGTCAGGAGGATATGGGAAGGCTCGGCCATGATCAGAACCAAGGGCGAGGCCGGGACC
GGCAACATCGTCGAGGCGGTCAGGCACGTCCGCCTAGTCGCCGAGGGGATAAGGCAGATTCAGGCCATGACCGACGAGCA
GGTCTACGGGGTTGCGGAGAAGTTCGCAGAGCCATACCTGAGGCTTGCCCTCAACGTCAAGGAGATAGCTGGCCTCCCAA
CGAGGGTCCTTGAGAACGAGCCGATTTACGGCCACTACACCTACCGCGAGATTGTCGATGGCCTCTACAGGGTTCTCCTC
GAAATAAAGAAGCTCGGCCGCCTTCCGGTTGTGAACTTCGCGGCCGGAGGAGTTGCAACGCCGGCAGATGCAGCTTTGAT
GATGCAGATGGGCATGGACGGCGTCTTTGTAGGCTCGGGAATCTTCAAGAGCTCCAACCCGCCCAAGATGGCCAGGGCCA
TAGTCGAGGCCGTCAACCACTGGGACGAGCCGGATGTTCTCGTCGAGATAAGCAAAGAGATCGGCGAGCCGATGAAGGGT
CAGGACATCGAAGAGCTCGAAGTCCGCCTTGAGGAGAGGGGCGTCTGA

Protein sequence :
MGRLDVIEAKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVSVMALHRVPADIRKAGGVARMAPIEKIQEIMDAV
TIPVMAKVRIGHVAEAKILEALGVDMIDESEVLTPSDPFFHIDKREFTVPFVCGARNLGEAVRRIWEGSAMIRTKGEAGT
GNIVEAVRHVRLVAEGIRQIQAMTDEQVYGVAEKFAEPYLRLALNVKEIAGLPTRVLENEPIYGHYTYREIVDGLYRVLL
EIKKLGRLPVVNFAAGGVATPADAALMMQMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLVEISKEIGEPMKG
QDIEELEVRLEERGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-63 55
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-63 54
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-63 54