Gene Information

Name : CL1_1240 (CL1_1240)
Accession : YP_006425233.1
Strain : Thermococcus sp. CL1
Genome accession: NC_018015
Putative virulence/resistance : Virulence
Product : iron(III)-siderophore ABC transporter permease 1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1198712 - 1199746 bp
Length : 1035 bp
Strand : -
Note : COG0609

DNA sequence :
ATGGATTACAGGGACTACGTGGCCAGAAGGGTCTTCATGGGCTTCCTCCTCCTTCTTTCCATCGTTCTGGTCAGCCTACA
CTCCCTCTCCCACGGGGCCTACCACCTGACGGTTGGGGAAGTCGTTGATGCCCTCCTCGGCGGCGGAACGGATAGTACTA
GGCTCATCGTCTGGAACATAAGGCTACCGAGAATAGTCGCGGGTCTTTTGGTCGGTGCCTCCCTGGCCATAGCCGGCGCT
GTCATGCAGGGCTTCCTCAGAAACCCCCTGGCGACTCCCTTCACGATGGGCGTCTCCCACGGTGCCATGTTCGGGGCATC
GCTGGCCATACTCCTCGGCGCAGGCTACGCCGAAAGTTCCGGAAGGATTTCACTCGACAACCCTTACGCCGTCGTCCTCT
TCGCTTTCATCGGAGCCATAAGCGCCACCGCGGTGATCCTGACACTTGCAAGGCTCAGGGGGCTTAGCCCGGAGGCAATA
ATCCTGGCCGGTGTGGCCATGAGCTCGCTCTTCGTCGCCATGACGACCCTCGTACAGTACTTCGCCGACGAGCTCCAGCT
CGCCGCGATGGTATACTGGAGCTTCGGAGACCTCGGACGGGCCACCTGGAGGGAGGACGCGATAATGTTCCTGACATTCG
CACCTGTTTTCACATACTTCCTTCTGAGACGCTGGGACCTGAACGCCTCCGCGGTGGGGGACGAGGTGGCGAAGAGCGTC
GGGGTGGAGGTGGAAAGGATCCGCCTCGTCTCGACGTTCCTGGCGGCGCTGATAACGGCAGTGAGCGTTGCCTTCGTCGG
AGTAATAGGCTTTGTAGGCCTCATAGCACCCCATGCAGTTAGGCTGATCGCCGGAGGCGACTACCGCTTCCTGATTCCAC
TCTCGGCCCTCACGGGCGCGCTCTTGCTCGTGACCGCTGACACTCTCGCGAGACTCATCATCTCCCCCGCGGTGCTCCCT
GTGGGCATAGTGACCTCATTCCTCGGCGCCCCGGCGTTCATCTACCTCCTGGTGAGAATGGAGGGCCGGAGATGA

Protein sequence :
MDYRDYVARRVFMGFLLLLSIVLVSLHSLSHGAYHLTVGEVVDALLGGGTDSTRLIVWNIRLPRIVAGLLVGASLAIAGA
VMQGFLRNPLATPFTMGVSHGAMFGASLAILLGAGYAESSGRISLDNPYAVVLFAFIGAISATAVILTLARLRGLSPEAI
ILAGVAMSSLFVAMTTLVQYFADELQLAAMVYWSFGDLGRATWREDAIMFLTFAPVFTYFLLRRWDLNASAVGDEVAKSV
GVEVERIRLVSTFLAALITAVSVAFVGVIGFVGLIAPHAVRLIAGGDYRFLIPLSALTGALLLVTADTLARLIISPAVLP
VGIVTSFLGAPAFIYLLVRMEGRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67369.1 putative permease Not tested PAI II CFT073 Protein 3e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CL1_1240 YP_006425233.1 iron(III)-siderophore ABC transporter permease 1 VFG0922 Protein 8e-35 41