Gene Information

Name : Terro_0995 (Terro_0995)
Accession : YP_006420651.1
Strain : Terriglobus roseus DSM 18391
Genome accession: NC_018014
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1119624 - 1121606 bp
Length : 1983 bp
Strand : +
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast

DNA sequence :
ATGACCGATCTCGACAAGCTGTCCATAGACACCCTCCGTCTCCTCGCCGTCGACGCCATTGAGAAGGCCGCAAACGGCCA
TCCGGGCGCGCCCATTGCGCTGTCGCCGCTCGCCTATCTGCTGTTCGTAAAGAACATGAAGCACGATCCGAGCGACCCGA
CCTGGACCGATCGTGACCGTTTCGTGCTGTCGAACGGGCACGCTTCCATGCTGCAGTATGGTGCTCTGCACCTGTCGGGA
TACGACCTGTCGCTTGAGGATCTGAAGAACTTCCGCCAGTGGCACTCCAAGGCGCCGGGACATCCGGAATACGGCTTTAC
GGCCGGCGTTGAAGTGACGACCGGACCGCTGGGCCAGGGCCTGGCGATGTCTGTTGGTATGGCGATCGCGGAGAAGCACC
TGGCAGCGATCTACAACCAGCCGGATATGGAGATCGTCAACCACCACACGTACTGCATTGTGGGTGATGGCTGTCTGATG
GAAGGCATCTCGCACGAGTCCTGCTCGCTGGCCGGAACGCTTGGCCTGGGCAAGCTGATCGTGTTCTACGACGACAACCT
GATCTCGCTGGACGGCCCCACGGAGCTGAGCTACACGGAGAACGTCGACGAGCGCTTCAATGCCTACAACTGGCACGTGC
AGTATGTCGACGACGGCAACGACCTGAACAAGCTGCAGCAGGCGATCAACATTGCGAAGCTGGAGACGGGCAAGCCGTCG
CTGATCCGCGTGCGCACGATCATCGGCTACGGTTCGCCGAAGGCCGGCACGAAGCACGTGCATGGCGAGGCGCTGGGCAA
GGAAGCGACCCGCAAGACGAAGGAATTTTACGGCTTCGATCCGGATGTCGACTTTGCAGAGCCGCAGGCCGCGTTGGACA
ACTGGGCGCAGGCGAAGACGACCGGCAAGCAGACGCATGATGCCTGGACCGAGCTGTTCAAGAAGTACGAAGCAGCTCAT
CCCGAGCTGGCGAAGACCTTCGACCGCATCATCAAGCAGGAGCTGCCGGCTGACTACGCGAAGGAGATCAAGCCCTTCTC
GACAGAGAAGGCGATCGCCACGCGTACTGCAGGCGAGGTTGTTCTGCAGGCACTGGGCAAGACACTGCCGGAGATGATGG
GCGGCGCAGCCGATCTGACCTCTTCGACGAAGACGATCTTCAAGGATTCGCAGTCGTTCCACGTCGACCCGAAGGGTAAG
AACATCTTCTTCGGCGTACGTGAGTTCGGCATGTGCGCTGCGGTTAACGGCATGGCTGCGCACGGCGGCTTTATCCCGTT
CGGCTCGACGTTCTTCGTGTTCAGCGACTACGCGCGTAACGCGATGCGTATGGCTGCGCTGATGAGCACGCACTCGCTGT
TCGTCTTCACGCATGATTCGATCGGCCTGGGCGCAGACGGTCCGACGCACCAGCCGGTCGAGCACCTGATGAGCCTGCGC
GCGATTCCGCAGCTTACCGACTTCCGCCCTGCGGATGCGAACGAGACTGCGGTCTGCTACCAGTTGATGGTGGAGCGCAA
GAGCGCTTCGTTCATGGCGCTTTCGCGCCAGGATCTGCCTGTTCTGGATGCGGAGAAGTATCCCGTGATGAGCGGACCTC
GGAAGGGCGCTTATGTCCTGATCGAACAGGAGAATGCGGACGTGATCATCGTCGCTACCGGTTCTGAGGTTTCGCTGGTC
TTGAAGACTCTGCCGGAGCTCGAGAAGGCCGGTATCAAGGCGCGCGTTATTTCCATGCCCAGCTTTGCTGTCTTCGAAGA
GCAGGATGAGGCGTACAAGAACAGCATCTTCCCGCATGGTGTGGCGAAGGTTGCTGTGGAAGCCGGCGCGACCATGGGCT
GGTGGAAGTACGTTGGGCGTGACGGTTCGGTAGTTGGCCTGGACCACTTCGGTGGTTCGGCACCGGGACCGGAAGTGCTT
GCGCACTTCGGTTTCACTCCGGAGAACATCGTCAAGGCTGCACAGACTGCGATTGGCAAGTAA

Protein sequence :
MTDLDKLSIDTLRLLAVDAIEKAANGHPGAPIALSPLAYLLFVKNMKHDPSDPTWTDRDRFVLSNGHASMLQYGALHLSG
YDLSLEDLKNFRQWHSKAPGHPEYGFTAGVEVTTGPLGQGLAMSVGMAIAEKHLAAIYNQPDMEIVNHHTYCIVGDGCLM
EGISHESCSLAGTLGLGKLIVFYDDNLISLDGPTELSYTENVDERFNAYNWHVQYVDDGNDLNKLQQAINIAKLETGKPS
LIRVRTIIGYGSPKAGTKHVHGEALGKEATRKTKEFYGFDPDVDFAEPQAALDNWAQAKTTGKQTHDAWTELFKKYEAAH
PELAKTFDRIIKQELPADYAKEIKPFSTEKAIATRTAGEVVLQALGKTLPEMMGGAADLTSSTKTIFKDSQSFHVDPKGK
NIFFGVREFGMCAAVNGMAAHGGFIPFGSTFFVFSDYARNAMRMAALMSTHSLFVFTHDSIGLGADGPTHQPVEHLMSLR
AIPQLTDFRPADANETAVCYQLMVERKSASFMALSRQDLPVLDAEKYPVMSGPRKGAYVLIEQENADVIIVATGSEVSLV
LKTLPELEKAGIKARVISMPSFAVFEEQDEAYKNSIFPHGVAKVAVEAGATMGWWKYVGRDGSVVGLDHFGGSAPGPEVL
AHFGFTPENIVKAAQTAIGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 8e-155 51
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 1e-146 47