Gene Information

Name : Terro_0505 (Terro_0505)
Accession : YP_006420181.1
Strain : Terriglobus roseus DSM 18391
Genome accession: NC_018014
Putative virulence/resistance : Unknown
Product : glycosidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 572642 - 574300 bp
Length : 1659 bp
Strand : +
Note : PFAM: Alpha amylase, catalytic domain

DNA sequence :
ATGATGAACGGCTATGTGCGGCAGTGGTGGAAGGAAGCGGTGGTCTACCAGATCTATCCGCGTAGCTTTCAGGATTCGAA
TGGAGACGGGATTGGGGATCTGCCTGGGATCACTTCGCGTCTAGATTATCTGAAAGAGCTTGGAGTGGATGTGCTGTGGC
TTTCGCCGCACTATGATTCGCCCAATGCGGACAATGGTTACGATATTCGCGACTACCGTAAGGTGATGCATGAGTTCGGA
ACCATGCAGGACTTTGACGACTTACTGGCTGGCGTGAAGTCTCGCGGGATGCGCTTGATTGTCGACCTGGTGGCGAACCA
TACTTCGGATGAGCATGCGTGGTTTGTTGAGAGTCGCAAGTCGAAGGAAAATGCTTTTCGCGATTATTACCTATGGCGAC
CAGGCAAGGTTGGGCCTGCGGGAGAATTACTGCCACCGAATAACTTTGGGTCGGCATTCTCCGGATCGGCTTGGACGCTG
GATCCAGTTACGGGTGAGTACTATCTCCACTTGTTTGCCCAGAAGCAGCCGGATCTGAACTGGGATAATCCGCAGGTGCG
GGAAGAGGTCTATGACCTGATGCGTTTCTGGCTGGATAAGGGCGTTAATGGTTTTCGCATGGATGTGATCCCGTTCATTA
GCAAGGACGCTGCTTTTCCCGATGTGCTGCCGCATGAGAGCCAGGTTCACATCAATGCGAATGGGCCGCATCTGCATGAG
TATCTGCGTGAGATGAATGATCGGGTGCTGTCGCACTACGACTGTATGACGGTGGGTGAGGCGCATGGCATCACCATTGA
AGACACACCGCAGCTGGTGGATGAGCGGCGTCATGAACTGAATATGATCTTCAACTTCGACACGGTGCGGCTGAACCGTG
ATGGACGTAATTGGCGGCAGTGGTCGCTGCCGGAGTTAAAGGCGATCTACGCGCGGCAGGACGTTGCGCTAGGCAAGCAT
TCCTGGAATACCATCTTCCTCGCGAACCACGATAATCCTCGTCTCGTAAGTGCCTTCGGTGATGATAGTCCGGAGTTTCG
CGTGCCCAGCGCGAAGTTACTTGCGACGATGTTACTGACGCTGAAGGGGACACCGTACCTATACCAGGGCGATGAGATCG
GGATGACGAATCATCCGTTTCAATCGATCGAAGAGTATGAAGATATTGAAGCGAAGAATGCCTGGAAGCATGATGTTCTT
ACGGGGCGTGAGAGTGCGGACCACTATCTTGCGAACCTTGGCAAAGTGAGTCGAGATCATGCTCGGACGCCGATGCAGTG
GGACTCGTCTGCTAACGCTGGATTTACTACTGCGAGCAAGCCGTGGCTTGCAGTGAATCCCAATTTCCAAGGAATTAACG
CGGCACAAGCTGTCGCGGATCCCAATTCGGTCTACCGCTACACACAACGTCTGCTGGCTCTGCGTCAGAGTACCCGCGCG
TTTGTGTACGGAGACTACGAAGACCTGGCGCCGGGGCATCCGTCGCTCTTCCTTTACGCACGAACTTTGGGTGATGAGCG
TTACGTGATTGCGCTGAACTTCTCGCGGGAGAGGGTTGCGCTGCCGGAGTCGGTCGCGACGGGCCGCGTCGCTTTATCCA
ACCTTGAAGGAACATTGTCTGAACTGAAAGGCTGGGAGGCACGTATTGTGTTGGCATGA

Protein sequence :
MMNGYVRQWWKEAVVYQIYPRSFQDSNGDGIGDLPGITSRLDYLKELGVDVLWLSPHYDSPNADNGYDIRDYRKVMHEFG
TMQDFDDLLAGVKSRGMRLIVDLVANHTSDEHAWFVESRKSKENAFRDYYLWRPGKVGPAGELLPPNNFGSAFSGSAWTL
DPVTGEYYLHLFAQKQPDLNWDNPQVREEVYDLMRFWLDKGVNGFRMDVIPFISKDAAFPDVLPHESQVHINANGPHLHE
YLREMNDRVLSHYDCMTVGEAHGITIEDTPQLVDERRHELNMIFNFDTVRLNRDGRNWRQWSLPELKAIYARQDVALGKH
SWNTIFLANHDNPRLVSAFGDDSPEFRVPSAKLLATMLLTLKGTPYLYQGDEIGMTNHPFQSIEEYEDIEAKNAWKHDVL
TGRESADHYLANLGKVSRDHARTPMQWDSSANAGFTTASKPWLAVNPNFQGINAAQAVADPNSVYRYTQRLLALRQSTRA
FVYGDYEDLAPGHPSLFLYARTLGDERYVIALNFSRERVALPESVATGRVALSNLEGTLSELKGWEARIVLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 1e-118 50