Gene Information

Name : Terro_4243 (Terro_4243)
Accession : YP_006423782.1
Strain : Terriglobus roseus DSM 18391
Genome accession: NC_018014
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5034460 - 5035137 bp
Length : 678 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGAGACTTCTGTTCATCGAAGATGAACCTGAGATTCAGAGTTTCGTCAAACGATCGCTGGAAGAGGCTGGATACCAGGT
CCATGCTGCGGACGATGGCGCGACGGCGCTTTCGCTTGCAGCGAAGCACGTCTATGACGGCGTTATTGCCGACCTGAATC
TGCCCGATTATGACGGCATTGAACTTATCCGGGAGCTGCGCCGGTCTGGAGTTACTGCGCCGGTTTTAATTCTGTCTGCG
CGCCGCTCGGTTGATGATCGCGTCAAAGGATTGGAGCTTGGCGGTGATGATTACCTGACCAAACCGTTTGCCGTGGCGGA
GTTATTGGCGCGGATGCGCAACCTGCTGCGACGGAACGCTCCCAACGAAGAGGATGTTACGCGGCTGCGCGTAGCGGACT
TGGAACTGGACATGCTGAAGCGAAGGGCGACGCGTGCCGGTGAGGTGCTGAACCTGAGTCCGCAGGAGTTCGGTTTGCTT
GAATATCTGTGCCGGCATGCTGGCAGGGTTGTAACCCGGTCGATGCTGCTGGCGGAGGTTTGGGGCATGCATATCCAGCC
GGACACGAACGTTGTGGACGTTCACATCTACAGGCTGCGCGGAAAGATTGACGTGGAAGGCCGCGAGCCGCTCATCAAGA
CATTGCGAGGGATTGGATATGTCCTCAAAAGCAGCTAA

Protein sequence :
MRLLFIEDEPEIQSFVKRSLEEAGYQVHAADDGATALSLAAKHVYDGVIADLNLPDYDGIELIRELRRSGVTAPVLILSA
RRSVDDRVKGLELGGDDYLTKPFAVAELLARMRNLLRRNAPNEEDVTRLRVADLELDMLKRRATRAGEVLNLSPQEFGLL
EYLCRHAGRVVTRSMLLAEVWGMHIQPDTNVVDVHIYRLRGKIDVEGREPLIKTLRGIGYVLKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-34 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-33 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 2e-41 49
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 4e-40 49
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 1e-34 48
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 5e-40 47
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 1e-39 46
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 2e-36 46
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 2e-35 45
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene5135. Protein 5e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 8e-35 45
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 2e-28 45
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 3e-35 43
Terro_4243 YP_006423782.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 2e-31 42