Gene Information

Name : Terro_4135 (Terro_4135)
Accession : YP_006423677.1
Strain : Terriglobus roseus DSM 18391
Genome accession: NC_018014
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4903386 - 4906025 bp
Length : 2640 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
ATGGCGATCAAGTGGGACAAGCTGACAGTGAAGTCGCAGGAGGCGCTGAGCGCCGCCGGGAGTATGGCCGCGGAGTTCGG
CAATCCGGAGGTGATGCCGTTGCACCTGCTGGCGGCGCTGCTGGAGGACCGCGAGGGCATCGTCCTGCCTGTGCTGGAGA
AGATGGACGTTCCCGCGCAGCAACTGCTGGCCAGCGTGAATGCCGCCGTCGGCAAGCTGCCACGCATCCAGGGTCAGCAG
CAGCAGCCTAATGGCGGCGGTGCGCTCAATCGTGTGCTGGAGCAGGCATTCAAAGAGGCCGGCAACTTCAAGGACGAGTA
CGTTTCGACCGAGCACCTGTTGCTGGCGCTTGCGCAGACCAAGAACGATCCTACCCAGACAGCCCTGGCGGCGTTGGGCG
CTACGCATGATGCCATCCTGCGTGCGCTGACGCAGGTTCGCGGGTCGCAGCGGGTGACCGACCAGAACCCTGAGGGCAAG
TTCCAGGCGCTGGAGAAGTACGGCAAGGACGTGACGAAGCAGGCGCGTGAGGGCCGCCTGGATCCCGTGATCGGTCGCGA
TGAAGAGATTCGCCGCGTCATCCAGGTGCTTAGCCGCCGTACCAAGAACAATCCCGTTCTCATTGGCGAACCCGGCGTGG
GCAAGACGGCTATCGTCGAAGGCCTTGCCAACCGGATCGTCCGCGGCGATGTACCGGAGTCGTTGAAGGACAAGCGTGTC
GTCTCGCTGGATCTTGCGAGCATGCTGGCGGGTGCGAAGTTCCGCGGCGAGTTTGAAGAGCGCCTGAAGGCGATGCTGAA
GGATATTGAGGATTCGCACGGCCAGATCATCCTGTTCATCGACGAGCTGCATACGCTCGTCGGTGCGGGTGCTTCGGAAG
GTGCGGTCGATGCCAGCAACATGCTGAAGCCCGCGCTGGCGCGCGGCGAGCTGCGTGCGATTGGCGCGACCACGCTGAAC
GAGTTCCGCAAGTACATCGAGAAGGATGCGGCGCTGGAGCGGCGCTTCCAGCAGGTGTACGTCGGTGAGCCGAATGTGGA
GGACACCATCGCCATCCTTCGCGGCCTGAAGGAGAAGTACGAGGCGCACCACAACGTGCGGATTAAGGACGCGGCGATCA
TCGCGGCGGCGGAGCTTTCGCACCGGTACATCAGCGACCGCTTCCTGCCGGACAAGGCGATCGACCTGGTCGATGAAGCC
GCGGCGTCGCTTGCCATCCAGATCGGTTCGGTGCCCGAGGAGATCGATGCGATCGACCGGCGAGTCATCTCGTTGCAGAT
TGAGAAGACCGCGTTGACGCGTGAGACGGATGCGAATTCTGTCGACCGTTTGGAGACCGTGGAGCGTGAGCTCGCGGAGC
TGCAGGAGAAGGCGAGCGGCCTGCGTGCGAAGTGGCAGCATGAGCGCGACGCCATCGGCAACATTACGGAGCTGAAGAAG
CAGGTGGAGAGCCTGCGCTTCGAGGCCGAGGACCAGACGCGTCGCGGCAACCTGGAGCGCGCGGCAGCGATTCGTTATGG
CGATTTGCCCAAGGCGGAGGCCGAGCTGCAGAAGCTGGAGGCCGAGCAGGACGCGGTGAACGATGGCACGGCGAGCCGCA
TGCTGAAGGAAGAGGTGGACGAGGAGGACATCGCCGACATCGTCTCGCGCTGGACGGGTATCCCGGTCAGCAAGATGCTG
GAGGGCGAGGTGCAGAAGCTGGTGCAGATGGAGACGCGTCTGCGCGAGCGGGTCATCGGGCAGGATGAGGCGCTGGTCGC
GGTAGCGAATGCGATCCGTCGCAGTCGTGCGGGTCTCAGCGATCCGAAGCGGCCGATCGGCTCGTTCATCTTCCTGGGCC
CGACGGGTGTGGGTAAGACGGAGACGGCGCGCGCGCTTGCGGACTTTATGTTCGACGATGAGCAGGCGATGGTCCGCATC
GACATGTCGGAGTACATGGAGAAGCACGCGGTGGCGCGGCTGATCGGCGCGCCTCCGGGGTACGTGGGTTTCGATGAGGG
CGGACAGTTGACCGAGGCGGTGCGTCGCCGGCCGTATGCCGTCATTCTCTTCGACGAGATTGAGAAGGCGCATCCAGATG
TCTTCAACGTGCTGCTGCAGGTGCTGGACGATGGCCGTCTGACGGATGCCAAGGGACGCACGGTGGATTTCAAGAACACG
GTGCTGATCCTTACGTCGAACATCGGTGCGAGCGCGTTGACGACGGCGTGGGCGGAGGGGCCGGATGGCTTCGAGGATGC
GAAGACGCGCGTGCTCGAGGAGCTGAAGAAGCACTTCCGGCCGGAGTTCCTGAATCGCGTGGATGACCTGGTGGTCTTCC
ATTCGCTGGGCGAGGAGCAGTTGACGCACATCGTCGACCTGCGCCTGGGCGAACTGCAGGCGTTGCTGACGGATCGCAAG
ATCAAGCTGGAGCTGACACCGAAGGCTCGGCACCTGATCTTTGAGGCGGGTTACGACCGTGCGTACGGTGCGCGGCCGCT
GAAGCGGGCGATCCAGCGGATGGTGCAGGATCCGCTGGCGATCAAGATCCTGAGCGGCGAGGTGCGGCATGGGGACCATG
TGGTGGTGGATGCGAAGGGCGAACACCTGACCTTCAACGTCACCGTGCATGAGGCTGTGCCGGAGCCTGTGGAAGTCTGA

Protein sequence :
MAIKWDKLTVKSQEALSAAGSMAAEFGNPEVMPLHLLAALLEDREGIVLPVLEKMDVPAQQLLASVNAAVGKLPRIQGQQ
QQPNGGGALNRVLEQAFKEAGNFKDEYVSTEHLLLALAQTKNDPTQTALAALGATHDAILRALTQVRGSQRVTDQNPEGK
FQALEKYGKDVTKQAREGRLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLANRIVRGDVPESLKDKRV
VSLDLASMLAGAKFRGEFEERLKAMLKDIEDSHGQIILFIDELHTLVGAGASEGAVDASNMLKPALARGELRAIGATTLN
EFRKYIEKDAALERRFQQVYVGEPNVEDTIAILRGLKEKYEAHHNVRIKDAAIIAAAELSHRYISDRFLPDKAIDLVDEA
AASLAIQIGSVPEEIDAIDRRVISLQIEKTALTRETDANSVDRLETVERELAELQEKASGLRAKWQHERDAIGNITELKK
QVESLRFEAEDQTRRGNLERAAAIRYGDLPKAEAELQKLEAEQDAVNDGTASRMLKEEVDEEDIADIVSRWTGIPVSKML
EGEVQKLVQMETRLRERVIGQDEALVAVANAIRRSRAGLSDPKRPIGSFIFLGPTGVGKTETARALADFMFDDEQAMVRI
DMSEYMEKHAVARLIGAPPGYVGFDEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRLTDAKGRTVDFKNT
VLILTSNIGASALTTAWAEGPDGFEDAKTRVLEELKKHFRPEFLNRVDDLVVFHSLGEEQLTHIVDLRLGELQALLTDRK
IKLELTPKARHLIFEAGYDRAYGARPLKRAIQRMVQDPLAIKILSGEVRHGDHVVVDAKGEHLTFNVTVHEAVPEPVEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-113 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Terro_4135 YP_006423677.1 ATP-dependent chaperone ClpB VFG2084 Protein 3e-112 42