Gene Information

Name : Terro_3878 (Terro_3878)
Accession : YP_006423422.1
Strain : Terriglobus roseus DSM 18391
Genome accession: NC_018014
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 4610931 - 4612394 bp
Length : 1464 bp
Strand : +
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGAGCGACAGCAGCGGATTTCTGGGCAACGGGCGCAGTGCAAAGATTGTGGCCACACTGGGGCCTTCGTCTTCAAGCGA
AGAGGTTTTTCGGAGCCTGGTACGTGCCGGCCTGGATGTTGCCCGGCTGAACTTTTCGCACGGATCGCATGAGCAGAAGG
CCGAACTGATCGCGATGGTTCGCAAGGTGAGCAAGGAAGAGGGCAAGCCCATCTGCATCCTTGCCGACCTGCAGGGGCCC
AAGATCCGCACGGGCAGGCTGGTTGGCGGCAAGCCCGTACTGCTGGAAGCGGGCAAGCAGCTCATCATTACGCCGAACGA
GATGGAAGGTACGGCCGAAAAGGTCAGCACTGTCTTCACGACGCTGGCGGAGAATCTTAGCCCTGGCGACACCATCCTGC
TTTCAGACGGCCTGATCGAACTGACCGTGGCCGAGATCCAGGGCACTGACGTGGTGTGCGACATCATCAACGGCGGCATG
CTGGGCGAAAAGAAGGGCATCAACCTGCCCGGCATTGCGGTGAATGTGCCCGCGTTGACCGAGAAGGACGAAGAAGACCT
GGTCTTCATTGCGACGCAGGGCGTGCATGCGCTGGCGCTGTCGTTTGTTCGTACCGCAGAGGACATTCGTTATGCGCGCC
GCCGCATGAAGCAGTTGAACTGCACGGCGTGGGTCGTCGCCAAGCTGGAGAAGCCGCAGGCGATTGAGAACCTGGAAGAG
ATTCTGGAAGAGACCGACGCGCTAATGGTTGCACGTGGCGATCTTGGCGTGGAAGTGCCACCGGAGAAGGTGCCGGCGAT
CCAGAAGCACATCATCCGTCGTGCCCTGGCCTATCGCAAGCCGGTAATTACCGCGACGCAGATGCTGGAGAGCATGATCG
ACAACCCGCGCCCCACACGCGCGGAAGTCAGCGACGTTGCCAACGCTGTGTATGACGGCACAGACGCCGTGATGCTGTCT
GCCGAGTCTGCTGCGGGTAAGTATCCCGTGCAGGCCGTTGCCATGATGGCGAAGATCATCGTGGAGTCGGAGGCGCAGAT
GGCGCTGGACCGCTCGACCGGGCCTCGTCCCCTGCACCATGCACGCGGCGCCAAGCTTAGTGTTGCAGAGACGATCTGCG
AAAGCATGGCGCACTCAGCCGAAGACCTGGACCTGAGCGCAATTGCCATCTTTACGGAGACCGGCACGTCCGCACGCCTG
ATTTCGATGTACCGGCCCAACGTTCGCATCTTTGCGCTGTCGAACGACGAAGAAGTAATCGGCAAAACGATGATGCTGTG
GGGCGTGCATTCCCTGTCAGTGGATCGTTTTGGCGCCGGTGATCTGCAGGTTTCTATGGCCGAGGAGACGCTGCGGACAC
GCGGTTTTGTGAAGGCTCGCGAGATCCTGGGAATCGTCGGCGGTACGGCGAGCCGCATTGGCGGCACCAACTTTATGAAG
CTGCACGAGGTCTCAGACCAGTAG

Protein sequence :
MSDSSGFLGNGRSAKIVATLGPSSSSEEVFRSLVRAGLDVARLNFSHGSHEQKAELIAMVRKVSKEEGKPICILADLQGP
KIRTGRLVGGKPVLLEAGKQLIITPNEMEGTAEKVSTVFTTLAENLSPGDTILLSDGLIELTVAEIQGTDVVCDIINGGM
LGEKKGINLPGIAVNVPALTEKDEEDLVFIATQGVHALALSFVRTAEDIRYARRRMKQLNCTAWVVAKLEKPQAIENLEE
ILEETDALMVARGDLGVEVPPEKVPAIQKHIIRRALAYRKPVITATQMLESMIDNPRPTRAEVSDVANAVYDGTDAVMLS
AESAAGKYPVQAVAMMAKIIVESEAQMALDRSTGPRPLHHARGAKLSVAETICESMAHSAEDLDLSAIAIFTETGTSARL
ISMYRPNVRIFALSNDEEVIGKTMMLWGVHSLSVDRFGAGDLQVSMAEETLRTRGFVKAREILGIVGGTASRIGGTNFMK
LHEVSDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-78 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-78 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-78 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-78 44
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 8e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Terro_3878 YP_006423422.1 pyruvate kinase VFG0479 Protein 5e-79 44