Gene Information

Name : Terro_3079 (Terro_3079)
Accession : YP_006422646.1
Strain : Terriglobus roseus DSM 18391
Genome accession: NC_018014
Putative virulence/resistance : Virulence
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3724697 - 3725392 bp
Length : 696 bp
Strand : -
Note : PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase

DNA sequence :
ATGGCGCGGGTCAAAGAGCTTACTGTTACAAAAAAGGGCGTGAGACAGACGCAGCCGACGAAGACTGCTAAACCACCTCG
GCCCGCGAAACCGGCAAAAGCCGTAAAGTCGGCTCGGCCCACGAAAGGTCAGTGCGTCGGGTACATCCGAGTGAGCACTC
TCGATCAGCGTGAGGACCGCCAGCTCGAAGGCGTGACGGTGGACCGCCGCTTCGTGGATCGTGTTTCAGGAAAAGACGTG
AAACGGCCACAACTCACAGCGATGCTTTCGTTCGTCCGCGAGGGAGACACTGTGGTGTGTCACTCGATGGATCGACTCGG
CCGCAACCTGGATGATCTTCGCAAGCTGGTTTTCGGCTTGACGGAGCGAGGCGTACGCGTCGAGTTCCGCAAGGAAAATC
TCATCTTCATCGGCGAGGACTCGCCGATGGCGAATCTATTGTTGAGCGTTATGGGAGCCATTGCAGAGTTTGAAAGGCAG
CTGATTCGTGAGCGCCAACGAGAGGGAATTGAGCTGGCCAAAAAGCGTGGCGTGTACAAAGGCAGGCCAAGAACGCTGAG
TGCGGAAGTCGTCGTTTCGCTCGTGCAGAGGTTTGAAGCCGGGGAGAAACCTTCGGTGCTTGCGCGAGAGTTTGGAGTTT
CGCGAATGACTCTGCACCGCTATAGAACGAGAGCGATCGGCGCAGGGTCCTCATGA

Protein sequence :
MARVKELTVTKKGVRQTQPTKTAKPPRPAKPAKAVKSARPTKGQCVGYIRVSTLDQREDRQLEGVTVDRRFVDRVSGKDV
KRPQLTAMLSFVREGDTVVCHSMDRLGRNLDDLRKLVFGLTERGVRVEFRKENLIFIGEDSPMANLLLSVMGAIAEFERQ
LIRERQREGIELAKKRGVYKGRPRTLSAEVVVSLVQRFEAGEKPSVLAREFGVSRMTLHRYRTRAIGAGSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 1e-56 70
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 8e-57 70
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 8e-57 70
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 3e-56 68
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 2e-54 65
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-22 41
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 5e-23 41
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 5e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Terro_3079 YP_006422646.1 site-specific recombinase, DNA invertase Pin VFG1030 Protein 5e-57 70