Gene Information

Name : Terro_2836 (Terro_2836)
Accession : YP_006422407.1
Strain : Terriglobus roseus DSM 18391
Genome accession: NC_018014
Putative virulence/resistance : Virulence
Product : nucleoside-diphosphate-sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3399600 - 3400526 bp
Length : 927 bp
Strand : -
Note : PFAM: NAD dependent epimerase/dehydratase family

DNA sequence :
ATGTCACGTGTGTTGATTACGGGTGGGGCCGGATTCATCGGTTCGCATCTGGTCCATCGCTTTGTAGAAGAGGGTGCGCA
GGTTCGAGCATTCGACAATCTCAGCTCAGGCAACATGGAAAACCTCGCAGCTGTGCGCGACCGCATTGAGTTCATCCAGG
GTGACGTGCAGGATGCAGAAGCAACGGCAGCAGCCTGCCGCGATGTAGACTACGTCTTCCACGAAGGAGCCATACCATCG
GTCCCGAAGTCGGTAGCGGATCCCTTGGGCACAGACAGCCCAAACCTGCGCGGCACCCTTCAAATGCTGGAGTCCGCACG
CAAAGCAGGCGTCAAGCGTTTCATCTTCGCCGCATCCTCCGCCGCATATGGCAACAATCCCGTGCTCCCCAAGCGCGAAG
ATATGATCCCGGAGCCGGTCTCGCCCTACGCCGTGCAGAAGGTCGCCAGCGAGCTCTACATGGGTAGCTATGCGCAGGTC
TTCGGTCTTCAGACAGTTGCACTGCGGTACTTCAATATCTTCGGCGTGCGGCAGGATCCGACCAGCCAGTACTCGGGTGT
CCTCGCTCGCTTCATCTCGCTCATGGCGAAGAACGAATGCCCAACCATCTTTGGCGATGGTGAGACCAGTCGCGACTTCA
CTCACGTCGACAACGTCGTGCAGGCGAACCTGCTCGCAGCCAGCGCTCCGGCCCATGTCTCAGGCCGCGTCTACAACGTT
GCCACGGGGCACCGCGTGACTCTGAATCATGCCTTCGCAACCATCGGCCGCATCATGGGCTTCGAGGGCAAACCACAGTA
CCAGCCCGAGCGCGAAGGCGACATCCGCCACTCCGTGGCGGACATCGCACGCGCGCAGGACGAACTGGGCTATCGCGTCA
CCGTAAGCTTTGAGGATGGTCTCGGAAAGATGCTCCGCAAGGGCTAA

Protein sequence :
MSRVLITGGAGFIGSHLVHRFVEEGAQVRAFDNLSSGNMENLAAVRDRIEFIQGDVQDAEATAAACRDVDYVFHEGAIPS
VPKSVADPLGTDSPNLRGTLQMLESARKAGVKRFIFAASSAAYGNNPVLPKREDMIPEPVSPYAVQKVASELYMGSYAQV
FGLQTVALRYFNIFGVRQDPTSQYSGVLARFISLMAKNECPTIFGDGETSRDFTHVDNVVQANLLAASAPAHVSGRVYNV
ATGHRVTLNHAFATIGRIMGFEGKPQYQPEREGDIRHSVADIARAQDELGYRVTVSFEDGLGKMLRKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-55 43
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-55 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Terro_2836 YP_006422407.1 nucleoside-diphosphate-sugar epimerase VFG0430 Protein 1e-55 43