Gene Information

Name : Terro_2396 (Terro_2396)
Accession : YP_006421989.1
Strain : Terriglobus roseus DSM 18391
Genome accession: NC_018014
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2864991 - 2865755 bp
Length : 765 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGACAGTAGCAGCGAACCAGTTGATTCACATCGAGGGGCTGACCAAGGTCTTCTATACAGACGAGATCGAAACGCATGC
GCTCAGTGGTGTGCACCTTTCGATCGCACGCGGTGAGTACGTTGCCATGAGCGGCCCGTCCGGTTGCGGCAAGTCCACGC
TGCTCTCCATCCTTGGTCTGCTCGACACGTCGACAGCCGGAGAGTACACGCTGAATGGTAAGCAGGTCGCAAATCTGAAC
TTCGCGGACCGCTCTCGTATTCGGAACCAGGAGATCGGGTTCATCTTTCAGAGCTTCAATCTCATTGGAGACCTGACGGT
CTTTGAGAATGTTGAATTGCCCCTTACCTATCGGGCTGGAATGAATGCCTCTGAGCGGAAGGACCGTGTGGTGCAGGCGT
TAGAGCGCGTGAACATGGCGCACCGACTCCGCCACTATCCCGCGCAACTGAGTGGAGGTCAACAGCAGCGTGTGGCTGTG
GCACGTGCGCTCGCTGGATCTCCCAGCATCCTTCTCGCCGACGAACCGACCGGCAACCTTGATTCCAAGAACGGCGAAGC
CGTTATGCGTCTGCTTGCCGATCTGCATGGCGAAGGAGCGACGATCTGCATGGTCACGCACGATCCCCGCTTCGCTGCGC
ACGCCGACCGCCAGGTTCACTTGTTTGACGGCAAGGTCGTAGCCGAAGGGGAACTGCAGCACCTGATCGCAGAGGCCGAC
CAGCAATACCAGGCCGGCTACCGCAATGGGAACGCTGTCCTCTAA

Protein sequence :
MTVAANQLIHIEGLTKVFYTDEIETHALSGVHLSIARGEYVAMSGPSGCGKSTLLSILGLLDTSTAGEYTLNGKQVANLN
FADRSRIRNQEIGFIFQSFNLIGDLTVFENVELPLTYRAGMNASERKDRVVQALERVNMAHRLRHYPAQLSGGQQQRVAV
ARALAGSPSILLADEPTGNLDSKNGEAVMRLLADLHGEGATICMVTHDPRFAAHADRQVHLFDGKVVAEGELQHLIAEAD
QQYQAGYRNGNAVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-24 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Terro_2396 YP_006421989.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-45 48
Terro_2396 YP_006421989.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 9e-36 48
Terro_2396 YP_006421989.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 6e-29 42
Terro_2396 YP_006421989.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 2e-27 42
Terro_2396 YP_006421989.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-27 41
Terro_2396 YP_006421989.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686946. Protein 1e-21 41