Gene Information

Name : Terro_1830 (Terro_1830)
Accession : YP_006421457.1
Strain : Terriglobus roseus DSM 18391
Genome accession: NC_018014
Putative virulence/resistance : Virulence
Product : type III secretion system ATPase, FliI/YscN
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.15
Position : 2169791 - 2171098 bp
Length : 1308 bp
Strand : +
Note : PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family

DNA sequence :
ATGGCGCTTGAGAGCTACTTTAGTCATCTGAAGACCTCGCCATTCGCGCGCTTGTATGGCGAGGTCGTGGAGGCGAACGG
CAGCTATGTGCAGTCGCTAGGGCCGCCGTGTTCTATAGGCGACTGCTGCGAGATTCATGGCAAGGACGGCACGCGCCACA
TGGCGGAGGTTATCGGGTTCCGAGCACACAATGTCCTGGCCATGCCGCTCTCCTCTGGTGCCGGTATTCGTTTCGGTGAC
CGGGTCTTTGGCTCCGGGACACCCGCCTCGCTAAGCGTCGGGATGGCGATGCTTGGTCGCGTGCTGGATGCCAACGGCCA
TCCCATCGACGGATACGGGGCGGTGCTGGGAGAGACATTGCTTCCGCTTGACCGGAACGCTCCCATGCCGCTGGAACGCA
CACGCATGCTGCAGCCCATCAGCGTTGGTGTCCGCGCCATCGACGCCATGATGACGGTCGCGCGCGGGCAGCGCATTGGT
ATCTTCGGTGGATCCGGCGTGGGTAAGAGCACCCTCATCGGCATGATGACAAGGAACACCGCAGCTGACCTGACGGTCGT
TGGCCTAGTCGGCGAACGCGGCCGAGAGGTGGGCGAGTTCCTGGAGGATTCACTCGGAGAAGAGGGCCGTTCTCGGTCTG
TCGTCCATGTGTCTACCTCCGATGAATCGCCGCTGATGCGCATGCGTTGCGCACTCGCTGCAACCACTACGGCTGAGTAC
TTTGCGGCTCGCGGGAAGCACGTCCTTCTTATCCTGGATTCCTTAACGCGCTATGCCATGGCAGCGCGCGAAATTGGTCT
TGCTGCGGGAGAGCCGCCCTCCACCAAGGGATACCCTCCCTCGGTTTTTGCAAAGATGGCTCGATTGCTGGAGCGCGCAG
GAAACTTCTCGAATGGCAGCATCACAGCTTTCTACACCGTCTTAATGGAAGGTGATGACGAGCAGGATCCAATCGTTGAT
GGCGCACGATCAATTCTTGACGGACACATCATCCTGTCACGCGAGATTGCCGGTGAGGGAAGATACCCGCCGATCGATAT
CCTTCGGTCGCTGAGCCGCTTGATGCCGGCGGTAGCCAGTGAGAGCCATCAGCTGCAGGCAAGGGCAGTCCGTCGCATGC
TGAGCGCCTATGCGCGTGGCGAAGATCTGCTGCGAGTCGGCGCATACAAAGCCGGGTCCGATCTCGAACTGGATCAGGCA
ATCGCTCTGCGTCCGCTCATCCTAAAGCTGCTCACCCAAGCCACGCACGAGAGGCATGACCTCAATAGCTCGGTCCAGGC
GTTAAACGATCTGACGGTGCTGCGATGA

Protein sequence :
MALESYFSHLKTSPFARLYGEVVEANGSYVQSLGPPCSIGDCCEIHGKDGTRHMAEVIGFRAHNVLAMPLSSGAGIRFGD
RVFGSGTPASLSVGMAMLGRVLDANGHPIDGYGAVLGETLLPLDRNAPMPLERTRMLQPISVGVRAIDAMMTVARGQRIG
IFGGSGVGKSTLIGMMTRNTAADLTVVGLVGERGREVGEFLEDSLGEEGRSRSVVHVSTSDESPLMRMRCALAATTTAEY
FAARGKHVLLILDSLTRYAMAAREIGLAAGEPPSTKGYPPSVFAKMARLLERAGNFSNGSITAFYTVLMEGDDEQDPIVD
GARSILDGHIILSREIAGEGRYPPIDILRSLSRLMPAVASESHQLQARAVRRMLSAYARGEDLLRVGAYKAGSDLELDQA
IALRPLILKLLTQATHERHDLNSSVQALNDLTVLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 8e-81 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-79 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-80 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 6e-79 49
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 8e-81 49
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-78 49
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-78 49
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 6e-70 49
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-77 48
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 9e-78 48
lscN AAO18044.1 LscN Virulence TTSS locus Protein 9e-77 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-64 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 6e-65 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-61 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-60 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-60 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-63 45
escN CAI43874.1 EscN protein Virulence LEE Protein 8e-64 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 6e-56 44
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-64 44
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-64 44
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 9e-64 44
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-63 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-56 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-56 44
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-63 44
escN AAC38383.1 EscN Virulence LEE Protein 1e-65 44
escN AAC31513.1 L0034 Virulence LEE Protein 7e-66 44
unnamed AAL06369.1 EscN Virulence LEE Protein 4e-63 44
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 7e-66 44
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-65 44
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-65 44
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-65 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 3e-56 43
escN AAK26715.1 EscN Virulence LEE Protein 3e-63 43
escN AAL57542.1 EscN Virulence LEE Protein 3e-63 43
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-63 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 9e-57 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 4e-52 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 4e-52 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-60 42
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-61 42
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-61 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 7e-57 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG1254 Protein 3e-81 53
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG2499 Protein 4e-78 52
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG2331 Protein 5e-78 49
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG0390 Protein 3e-74 47
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG0192 Protein 5e-74 47
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG0048 Protein 1e-70 45
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG0515 Protein 5e-64 44
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG0730 Protein 7e-66 44
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG0812 Protein 4e-66 44
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG2144 Protein 1e-73 43
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG2459 Protein 6e-55 41
Terro_1830 YP_006421457.1 type III secretion system ATPase, FliI/YscN VFG1778 Protein 1e-52 41