Gene Information

Name : Terro_1560 (Terro_1560)
Accession : YP_006421202.1
Strain : Terriglobus roseus DSM 18391
Genome accession: NC_018014
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1840077 - 1841894 bp
Length : 1818 bp
Strand : -
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
ATGTTCGCATCCGATTTCGAAGAAGAGCAATACAAGCTACGCCAGGAAAAGCTCACAAAGATCCAGGAGCTTGGCGTGCA
GGCCGGCCTGTTGCCGCTGGAAGCCACCTATCCCAACAGCTTTCCGTTCACGCACACTGCGCCGCAGATCCTGGGCACCT
ACGTCGACGTCACCGGCGAACAGCTTGAGGCCGACAAGCCCGCAGTCGCCAGCGCCGGCCGCGTCATGGCGCATCGCCGC
CAGGGCAAGGCAGGCTTTGCCGTGTTGCAAAACAACGGCGTCCGCCTGCAGATCTACGTGCGGAAGGACGACGTGGGCGA
GCCCGCCTTCGAACTCTACAAACTGCTCGACCTCGGCGACCACATCGGCGTGAAGGGCTTCCTCTTCCGCACGCGCACCG
GCGAACTGACCGTGCACGTGCAGGAGCTCGTCTTCCTGTCGAAGAGCATGCTCGCGCTACCCGACAAGTTCCACGGCCTT
ACCGACATTGAGCTGCGCTACCGCCAGCGGTACGTCGACCTGTTCATGGATACCGGCGAAGACGCCGCCGAGCCGTCCAC
CGAGGAGGCTGCGGCCGATAGCGAAAATCCCGAGGCCATCGCCGCCGCAACGGCCCCGCTCAAGCGCCTGCCCGCACGCG
AGGTCTTCGTGAAGCGCGCCCAGATCCTGAAGGCGCTACGCACTTACTTCGACAGCCGCGGCTACATCGAAGTCGAGACG
CCCATGATGCAGCCGGTCGCCGGCGGCGCAGCGGCGCGTCCGTTCGTCACGCACCACAACACCATGGACATGGAGCTCTA
CCTGCGCATCGCGCCGGAGCTCTACCTGAAGCGCCTGGTCGTCGGCGGCATGGACCGCGTCTACGAGATCAATCGCAACT
TCCGCAACGAAGGTATCAGCACCCAGCACAATCCTGAGTTCACGATGCTGGAGTTCTACCAGGCCTACGCGAACTACCAC
GACCTGATGAACATCACGGAAGAGATCATCACCTTCGTCGCCAACGAAGTGAATGGGACGACGCTGATCAACTTCCCGCT
GCCCAAGGGGCCTCGCGCTGGCGAGATGGTTGAGATTGATCTTGGGAAGTGGACGAAGCTTTCGATGAAGGAAGCGATTA
TCAAGTGGTGGCCAAAGGAACTTGGCGAAGCCCCCACGAGCAGCACCTTCGACAATACGGTGGAGTTCAATCACTTCGTA
GTGAATGCACTGGCGGCCTCAAAGCGACTTGCCTACCCACCCGACTCCGCGCTCAATTCCAATGAAGCTGATCGAGGCGT
CAACTTCGTTGATCTGCCGCAAAAGTGGATAGCGCTGAATAGAACACTGTTCGCTATCGCAGACGAGATGAATCAGTCCA
CGCCTCTCGGGAAGCGAATTTCCGACCTGTTTGAAGCCGTCGCTGAAGAACATCTCATTCAGCCGCACATCATCTACGAC
TTCCCGCTAGCCGTCAGCCCACTCAGCAAGGTCAAGCCAGACGAACCCGACTGGGTTGAGCGCTTCGAGTTCTACATTGG
CGGCTTCGAGATCGGAAACGCCTTCAGCGAGTTGAATGACCCGGAAGATCAGCGACGCCGCTTTGAAGATCAGCTTCACG
AGAAGGAACGCGGCGACGACGAGGCCCACGCCATGGACGCTGACTACGTTCGGGCGCTTGCCTATGGCCTGCCACCCACC
GGCGGCGAAGGCATCGGCATCGACCGTCTGACCATGCTGCTCACCGGCTCGCGCTCCATCCGCGATGTCATCCTCTTCCC
GCTGCTTCGGCCCGCAAAGAAGCCGGTGTTGGAGAAGTCCGAAGAACCTTCAAGCTAG

Protein sequence :
MFASDFEEEQYKLRQEKLTKIQELGVQAGLLPLEATYPNSFPFTHTAPQILGTYVDVTGEQLEADKPAVASAGRVMAHRR
QGKAGFAVLQNNGVRLQIYVRKDDVGEPAFELYKLLDLGDHIGVKGFLFRTRTGELTVHVQELVFLSKSMLALPDKFHGL
TDIELRYRQRYVDLFMDTGEDAAEPSTEEAAADSENPEAIAAATAPLKRLPAREVFVKRAQILKALRTYFDSRGYIEVET
PMMQPVAGGAAARPFVTHHNTMDMELYLRIAPELYLKRLVVGGMDRVYEINRNFRNEGISTQHNPEFTMLEFYQAYANYH
DLMNITEEIITFVANEVNGTTLINFPLPKGPRAGEMVEIDLGKWTKLSMKEAIIKWWPKELGEAPTSSTFDNTVEFNHFV
VNALAASKRLAYPPDSALNSNEADRGVNFVDLPQKWIALNRTLFAIADEMNQSTPLGKRISDLFEAVAEEHLIQPHIIYD
FPLAVSPLSKVKPDEPDWVERFEFYIGGFEIGNAFSELNDPEDQRRRFEDQLHEKERGDDEAHAMDADYVRALAYGLPPT
GGEGIGIDRLTMLLTGSRSIRDVILFPLLRPAKKPVLEKSEEPSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-98 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Terro_1560 YP_006421202.1 lysyl-tRNA synthetase VFG1668 Protein 6e-99 43