|
Name : Terro_1542 (Terro_1542) Accession : YP_006421184.1 Strain : Terriglobus roseus DSM 18391 Genome accession: NC_018014 Putative virulence/resistance : Unknown Product : hydroxymethylpyrimidine synthase Function : - COG functional category : - COG ID : - EC number : - Position : 1824052 - 1825533 bp Length : 1482 bp Strand : + Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC DNA sequence : ATGAGCGCACTCGCGGGCAGCAACGGTAACGGACACAACGGCAATGGAAAGCAGTACGACGTGCCAACGCCGCGCGCGGA GTGGATCGTCAAGCGCCGCGAAGAGGCAGCACGCACCGGCGACACGAACATGAGCCAGATGCACTTTGCACGCAAGGGCC TGATCACGGAAGAGATGGCTTATGTTGCGCACAAGGAGAAGCTGGCACCGGAGTTCATCCGCAGTGAGATCGCCAAGGGA ACGATGATTATCCCGGCGAACGTCATGCACCCGGAGCTGGAGCCCATGGCGATCGGCGTCGGCTCGCTGTGCAAGATCAA CGCGAATATCGGCAATTCCGCGCTTGTTTCCAATGTGGATGAGGAGCTGCGCAAGCTGCACACCGCTGTTCACTTTGGTG CAGACACGGTGATGGATCTCTCGACCGGCGGCGACATTCCGATGATTCGCGAAGCCATCATTCGTCACTCGCCGGTGCCG ATCGGTACCGTGCCGTTGTACGAGGCGCTGAGCCGCGTGAAGCGTGTTGAGGATCTGAACATCGATCTTTACCTCGAGGT GATCGAGGAGCAGGCGCAGCAGGGCGTCGATTACTTTACGATCCACGCCGGCGTGCTGATCCAGTATGTGCCGATGGTTT CGAAGCGCATCACCGGCATTGTGTCGCGTGGCGGCGCGATCCTGGCGCAGTGGATGACGGCAAACCACAAGCAGAACTTC CTCTACGAGAACTTTGACCGCATCACCAAGATCATGGCGAAGTACGACGTGAGCTACTCGCTGGGCGATGGCCTGCGGCC GGGTTGCGTTGCGGATGCTTCGGATGAGGCACAGTTTGCCGAGCTGAAGACCTTGGGTGAGCTGACCCGTCAGGCGTGGA AGGACGATGTCCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGGACAAGATCAAGGAGCAGGTCGACAAGGAAGTC GAGCTTTGCGACGGCGCTCCGTTCTACGTGCTTGGACCGCTGGTTACGGATATTGCACCGGGCTATGACCACATCACCTC CGCGATTGGTGCGGCGATGATCGGTTGGCACGGCGCGGCGATGCTCTGCTACGTGACGCCGAAGGAGCACCTCGGTCTAC CGAACGAGAAGGACGTAAAGGACGGCATCATTGCGTACAAGATCGCCGCGCACGCAGCGGATATTGCACGGCACCGGCCG GGTGCTCGTGATCGTGATGACGCTATTTCGCATGCTCGTTACACGTTCGATTGGGATGCGCAGTTTGACCTGTCGCTGGA TCCTGAGACCGCTCGTGGAATGCACGACGAGACGTTGCCGGATGATTACTACAAGGAAGCGGCCTTCTGCAGCATGTGCG GACCGAAGTTCTGCTCGATGAACTGGTCGAGCAAGGTCGACAAGTACAACGAAGAGGTTCATGGTTTGAAGAAGCCGGAG CTGACGCAGATCATGACGGAGCAGCTGGCTCTACGCGGATAA Protein sequence : MSALAGSNGNGHNGNGKQYDVPTPRAEWIVKRREEAARTGDTNMSQMHFARKGLITEEMAYVAHKEKLAPEFIRSEIAKG TMIIPANVMHPELEPMAIGVGSLCKINANIGNSALVSNVDEELRKLHTAVHFGADTVMDLSTGGDIPMIREAIIRHSPVP IGTVPLYEALSRVKRVEDLNIDLYLEVIEEQAQQGVDYFTIHAGVLIQYVPMVSKRITGIVSRGGAILAQWMTANHKQNF LYENFDRITKIMAKYDVSYSLGDGLRPGCVADASDEAQFAELKTLGELTRQAWKDDVQVMIEGPGHVPMDKIKEQVDKEV ELCDGAPFYVLGPLVTDIAPGYDHITSAIGAAMIGWHGAAMLCYVTPKEHLGLPNEKDVKDGIIAYKIAAHAADIARHRP GARDRDDAISHARYTFDWDAQFDLSLDPETARGMHDETLPDDYYKEAAFCSMCGPKFCSMNWSSKVDKYNEEVHGLKKPE LTQIMTEQLALRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 2e-132 | 63 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 2e-132 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 4e-122 | 58 |
