Gene Information

Name : Terro_1488 (Terro_1488)
Accession : YP_006421130.1
Strain : Terriglobus roseus DSM 18391
Genome accession: NC_018014
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1758820 - 1761312 bp
Length : 2493 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGTTCGAGCGTTATACCGAAAAAGCGCGGCGCGTGATCTTCTTTGCGCGTTACGAAGCAAGTCAGTTTGGCTCGCCTTA
CATTGAGACGGAGCACCTGTTATTGGGTCTGCTCCGCGAAGACAAGGCGCTGACCAATCGGTTCCTCCGCTCGCACGCCT
CGGTGGAATCGATCCGCAAGCAGATTGAAGGACATACGACCATTCGCGAGAAGGTATCGACCTCCGTCGACCTCCCCCTC
TCCAACGAATGCAAGCGTGTGCTCGCCTATGCCGCGGAAGAAGCAGAACGGCTGAGCCACAAACATATCGGCACGGAGCA
CCTCCTGCTGGGTCTGTTGCGCGAAGAGAAGTGCTTCGCCGCAGAGATCCTCATGGAGCGTGGCCTGCGCCTGCCCACCA
TTCGTGAGGAGCTCCAGCGCACCACGCAGGAGAAGCCAGCACAGCAGCAGGGCGGCAGCAAGCAGGGTCGAGCCCAGCAA
CAGGGCGGCGGTGGCGAACAGAGCATGCTGGCAGAGTTCTCCCGCGACCTGACCCAGGCCGCCATGGATCAGCAGCTGGA
TCCGCTCGTCGGCCGGGACACGGAAGTCGATCGCGTCATCCAGATCCTCTGCCGCCGGACCAAGAACAACCCGGTCCTCA
TCGGCGAGCCTGGTGTGGGCAAAACGGCAATCGTAGAAGGCCTCGCACAGAAGATCGCCGACGGCGAAGTCCCCAGCTTC
CTGGCGGACAAGCGCGTCCTGTCGCTTGACCTCTCTCTGATCGTCGCCGGCACCAAGTACCGCGGCCAGTTTGAAGAGCG
CCTGAAGACCATCATGAAAGAACTGATGGAGAACCAGAACAGCATCGTCTTCATCGACGAGCTGCACACACTGGTGGGCG
CTGGATCTGCTGAGGGCTCGCTCGACGCAGCCAACATCCTCAAGCCCGCACTTTCGCGCGGCGAGATCCAGTGCATCGGT
GCAACCACACCGGCCGAGTTCCGCAAGTCCATCGAGAAGGATCGCTCGCTGGAACGGCGCTTCCAGGCCGTCAAGGTGCC
GCCACCGAATGAAGAAGATGCCATCAAGATCATCATGGGCATCAAGGACAAGTACGAGAAGTTCCATGCGGTCAGCTACA
CGGATGAGGCCATTACCTTCTCTGTGACGCACTCCTCGCGGTACATCCCGGACCGTTTCCTGCCGGACAAGGCCATCGAT
CTGATCGACGAGGCGGGCGCTCGCGTGAAGTTGCGCCAGACCACCCTGCCCGAAGAGCTGACCGAGGTGCAGAAGCGCAT
CAAGTTCATCGTCCACCGCATGGAAAACGCGATTGCGAACCACGAGTTCGAGAAGGCGCGCTTCTACAGCGACGAAGAGC
GGAAAGAGCGTGAGAACCTTCGCGCCCTGCGTGACAAGTACCACCTCGATGACTCGTCCTCGGGCATTGTGACGAAGGAA
GACATTGAGGACGTGGTCAGCCGCTGGACGGGCGTACCCATCAACTCGCTGAAGGAAGAAGAGATGTCGAAGCTGATGCG
CGTGGAAGAAGAACTCCACAAGCGTGTCATCAGCCAGGAGAAGGCGATCAGCGCCCTCTCCCGCGCCATCCGGCGTTCGC
GCGCGGGCCTGAAGAACCCTGCGCGTCCTATCGGCTCGTTCCTCTTCCTCGGACCAACTGGCGTCGGCAAGACGGAGATG
GCGCGCACTCTGGCGCAGTTCCTCTTCGGCAGCGACAAGAGCCTCATCCGCTTCGATATGTCGGAGTTCATGGAGAAGCA
CTCGATCAGCAAGCTGATCGGTTCGCCTCCGGGCTACGTCGGTTACGAAGAGGGCGGTCAGCTCACCGAACGCGTCAAGC
GGTCGCCGTATTCGGTCGTGCTCCTCGACGAAATCGAGAAGGCGCACCCGGATGTCTTCAACCTGCTGTTGCAGGTCTTT
GAAGATGGCCACCTGACCGACGGCCTGGGCAACACTGTCGACTTCAAGAACACGATCCTCATCATGACGTCGAACATCGG
CGCCAAGCACCTGATGAAGCGTGAAGGCCTCGGCTTCGCCTCGAACAAGGAAGAGATTGTCCTTGAAAAGATGGAGGAGA
TGGTGAAGCAGGAAGTGAAGCGTACCTTCAATCCTGAGTTCATCAACCGCCTGGACGAGATCATCGTCTTCACGTCGCTG
TCGGATGCAGACCTGATGCAGATCCTGGAGCTGCTGGTGCAGAACCTGAACACCAACCTGGTGCACAAGGCCATCACCAT
CAGCGTCAACGACGAGGCCAAGAAGTGGATCCTCGACAAGACGCTCGTCGACCGCAGCTACGGCGCCCGTCCGCTACGCC
GCGCCCTCCAGCGCTACGTGGAAGACCCGCTCTCTGAAGCCCTGATCGCAGGCCAGATCACGGCACGGCCCGCGTTCCTT
GAGGTCTACCTCTCGGGCGACAAGCTCTTCTACCGTCCCGTCGCGCAGGAAGGCGATGAGCAGATGGAAGGCGCCGCACT
CGCCATCGTCTAG

Protein sequence :
MFERYTEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKALTNRFLRSHASVESIRKQIEGHTTIREKVSTSVDLPL
SNECKRVLAYAAEEAERLSHKHIGTEHLLLGLLREEKCFAAEILMERGLRLPTIREELQRTTQEKPAQQQGGSKQGRAQQ
QGGGGEQSMLAEFSRDLTQAAMDQQLDPLVGRDTEVDRVIQILCRRTKNNPVLIGEPGVGKTAIVEGLAQKIADGEVPSF
LADKRVLSLDLSLIVAGTKYRGQFEERLKTIMKELMENQNSIVFIDELHTLVGAGSAEGSLDAANILKPALSRGEIQCIG
ATTPAEFRKSIEKDRSLERRFQAVKVPPPNEEDAIKIIMGIKDKYEKFHAVSYTDEAITFSVTHSSRYIPDRFLPDKAID
LIDEAGARVKLRQTTLPEELTEVQKRIKFIVHRMENAIANHEFEKARFYSDEERKERENLRALRDKYHLDDSSSGIVTKE
DIEDVVSRWTGVPINSLKEEEMSKLMRVEEELHKRVISQEKAISALSRAIRRSRAGLKNPARPIGSFLFLGPTGVGKTEM
ARTLAQFLFGSDKSLIRFDMSEFMEKHSISKLIGSPPGYVGYEEGGQLTERVKRSPYSVVLLDEIEKAHPDVFNLLLQVF
EDGHLTDGLGNTVDFKNTILIMTSNIGAKHLMKREGLGFASNKEEIVLEKMEEMVKQEVKRTFNPEFINRLDEIIVFTSL
SDADLMQILELLVQNLNTNLVHKAITISVNDEAKKWILDKTLVDRSYGARPLRRALQRYVEDPLSEALIAGQITARPAFL
EVYLSGDKLFYRPVAQEGDEQMEGAALAIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 8e-177 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Terro_1488 YP_006421130.1 chaperone ATPase VFG0080 Protein 2e-145 52
Terro_1488 YP_006421130.1 chaperone ATPase VFG0079 Protein 0.0 49