Gene Information

Name : Aeqsu_0866 (Aeqsu_0866)
Accession : YP_006417384.1
Strain : Aequorivita sublithincola DSM 14238
Genome accession: NC_018013
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 893317 - 894024 bp
Length : 708 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGATAGATATCAAAAACCTTCACAAATCATATCACATGGGTAAAAATTCACTCCATGTTTTAAAAGGAATAAATTTTTC
AGTTTCTGAAGGCGAAATGGTTTCAATAATGGGTTCTTCTGGTTCTGGAAAATCTACTTTGTTGAATATACTTGGAATTC
TCGATGAAGCGGACGAAGGAACTTACACTCTCGATGGCACACTGATTAAAAACTTAAATGAAAAAGTTGCCGCACGCTAC
CGCAACCAGTTTCTTGGTTTTATTTTTCAATCATTCAATCTTATTAATTACAAATCTGCTTTGGATAATGTTTCAATGCC
GCTTTATTACCAAGGTGTAAAGCGAAATGTACGCACCGAAAAAGCAATGCACTATCTTGAAAAAGTAGGCTTGGCAGATT
GGGCTTCACATCTTCCCAATGAACTTTCCGGAGGTCAAAAACAACGTGTTGCAATTGCACGAGCTTTAGCCAGCGATCCA
AAACTTTTGCTAGCAGATGAACCAACGGGAGCACTGGATACTAAGACTTCTTATGAAGTAATGGAACTAATTCAAGGCAT
TAACGACGAAGGAAAAACAATCCTAATCGTGACCCACGAAGACGATATTGCCCATATGACCAAACGAATCGTAAACCTAA
AGGATGGGTTGATTATTGACGATTCTAAAGTGACTCAAGTTCGTGCAAAAGCAGAAAACTATGTTTAA

Protein sequence : 
MIDIKNLHKSYHMGKNSLHVLKGINFSVSEGEMVSIMGSSGSGKSTLLNILGILDEADEGTYTLDGTLIKNLNEKVAARY
RNQFLGFIFQSFNLINYKSALDNVSMPLYYQGVKRNVRTEKAMHYLEKVGLADWASHLPNELSGGQKQRVAIARALASDP
KLLLADEPTGALDTKTSYEVMELIQGINDEGKTILIVTHEDDIAHMTKRIVNLKDGLIIDDSKVTQVRAKAENYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aeqsu_0866 YP_006417384.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 5e-54 54
Aeqsu_0866 YP_006417384.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-35 42
Aeqsu_0866 YP_006417384.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 4e-39 41